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    Mrps6 mitochondrial ribosomal protein S6 [ Mus musculus (house mouse) ]

    Gene ID: 121022, updated on 31-Jan-2019

    Summary

    Official Symbol
    Mrps6provided by MGI
    Official Full Name
    mitochondrial ribosomal protein S6provided by MGI
    Primary source
    MGI:MGI:2153111
    See related
    Ensembl:ENSMUSG00000039680
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AW046321
    Expression
    Ubiquitous expression in genital fat pad adult (RPKM 60.3), placenta adult (RPKM 42.8) and 28 other tissues See more
    Orthologs

    Genomic context

    See Mrps6 in Genome Data Viewer
    Location:
    16; 16 C4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 16 NC_000082.6 (92058336..92112227)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (92058581..92112472)

    Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 36905 Neighboring gene predicted gene, 18020 Neighboring gene solute carrier family 5 (inositol transporters), member 3 Neighboring gene predicted gene, 41496 Neighboring gene predicted gene, 41495 Neighboring gene predicted gene, 29880

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    rRNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    small ribosomal subunit rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    structural constituent of ribosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    mitochondrial translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    mitochondrial small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mitochondrial small ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial small ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    mitochondrion HDA PubMed 
    ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    28S ribosomal protein S6, mitochondrial
    Names
    MRP-S6
    S6mt

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_080456.1NP_536704.1  28S ribosomal protein S6, mitochondrial

      See identical proteins and their annotated locations for NP_536704.1

      Status: PROVISIONAL

      Source sequence(s)
      BC027271
      Consensus CDS
      CCDS28332.1
      UniProtKB/Swiss-Prot
      P58064
      UniProtKB/TrEMBL
      Q3TLQ4
      Related
      ENSMUSP00000037631.8, ENSMUST00000047429.8
      Conserved Domains (1) summary
      cd15465
      Location:396
      bS6_mito; Mitochondrial Ribosomal Protein (MRP) S6

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000082.6 Reference GRCm38.p4 C57BL/6J

      Range
      92058336..92112227
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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