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    Bach1 BTB and CNC homology 1, basic leucine zipper transcription factor 1 [ Mus musculus (house mouse) ]

    Gene ID: 12013, updated on 5-Mar-2019

    Summary

    Official Symbol
    Bach1provided by MGI
    Official Full Name
    BTB and CNC homology 1, basic leucine zipper transcription factor 1provided by MGI
    Primary source
    MGI:MGI:894680
    See related
    Ensembl:ENSMUSG00000025612
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI323795; 6230421P05Rik
    Expression
    Ubiquitous expression in thymus adult (RPKM 12.9), large intestine adult (RPKM 9.3) and 27 other tissues See more
    Orthologs

    Genomic context

    See Bach1 in Genome Data Viewer
    Location:
    16; 16 C3.3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 16 NC_000082.6 (87698954..87733346)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (87699199..87733591)

    Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene Map3k7 C-terminal like Neighboring gene predicted gene, 41485 Neighboring gene predicted gene, 32925 Neighboring gene RIKEN cDNA 2810407A14 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    transcription regulator protein BACH1
    Names
    BTB and CNC homolog 1
    BTB and CNC homology 1 transcription factor

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007520.2NP_031546.1  transcription regulator protein BACH1

      See identical proteins and their annotated locations for NP_031546.1

      Status: VALIDATED

      Source sequence(s)
      AC164108, AK140903, AK141405
      Consensus CDS
      CCDS28293.1
      UniProtKB/Swiss-Prot
      P97302
      UniProtKB/TrEMBL
      Q3URL4, Q3US24
      Related
      ENSMUSP00000026703.5, ENSMUST00000026703.5
      Conserved Domains (3) summary
      smart00225
      Location:35127
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd14719
      Location:554624
      bZIP_BACH; Basic leucine zipper (bZIP) domain of BTB and CNC homolog (BACH) proteins: a DNA-binding and dimerization domain
      pfam00651
      Location:24127
      BTB; BTB/POZ domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000082.6 Reference GRCm38.p4 C57BL/6J

      Range
      87698954..87733346
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006522879.3XP_006522942.1  transcription regulator protein BACH1 isoform X1

      See identical proteins and their annotated locations for XP_006522942.1

      UniProtKB/Swiss-Prot
      P97302
      UniProtKB/TrEMBL
      Q3URL4
      Conserved Domains (3) summary
      smart00225
      Location:35127
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd14719
      Location:554624
      bZIP_BACH; Basic leucine zipper (bZIP) domain of BTB and CNC homolog (BACH) proteins: a DNA-binding and dimerization domain
      pfam00651
      Location:24127
      BTB; BTB/POZ domain
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