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    Baalc brain and acute leukemia, cytoplasmic [ Mus musculus (house mouse) ]

    Gene ID: 118452, updated on 10-Oct-2019

    Summary

    Official Symbol
    Baalcprovided by MGI
    Official Full Name
    brain and acute leukemia, cytoplasmicprovided by MGI
    Primary source
    MGI:MGI:1928704
    See related
    Ensembl:ENSMUSG00000022296
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2810457D07Rik
    Annotation information
    Annotation category: suggests misassembly
    Annotation category: partial on reference assembly
    Expression
    Biased expression in frontal lobe adult (RPKM 33.0), cortex adult (RPKM 32.4) and 3 other tissues See more
    Orthologs

    Genomic context

    See Baalc in Genome Data Viewer
    Location:
    15 B3.1; 15 15.18 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    108 current GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (38933909..38952917)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (38765455..38782810)

    Chromosome 15 - NC_000081.6Genomic Context describing neighboring genes Neighboring gene ATPase, H+ transporting, lysosomal V1 subunit C1 Neighboring gene predicted gene, 45924 Neighboring gene predicted gene, 33123 Neighboring gene ATPase family, AAA domain containing 3A pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    neuron projection IEA
    Inferred from Electronic Annotation
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
     
    synapse IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    brain and acute leukemia cytoplasmic protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_080640.5NP_542371.1  brain and acute leukemia cytoplasmic protein isoform 1-6-8

      See identical proteins and their annotated locations for NP_542371.1

      Status: VALIDATED

      Source sequence(s)
      AC164883, AK045383, AK079337, AU259596
      UniProtKB/Swiss-Prot
      Q8VHV1
      Related
      ENSMUSP00000154447.1, ENSMUST00000226440.1
      Conserved Domains (1) summary
      pfam06989
      Location:149
      BAALC_N; BAALC N-terminus

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 108 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p6 C57BL/6J

    Genomic

    1. NC_000081.6 Reference GRCm38.p6 C57BL/6J

      Range
      38933909..38952917
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCm38.p6 PATCHES

    Genomic

    1. NW_012132909.2 Reference GRCm38.p6 PATCHES

      Range
      157921..233434
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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