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    Mrps2 mitochondrial ribosomal protein S2 [ Mus musculus (house mouse) ]

    Gene ID: 118451, updated on 23-Jun-2021

    Summary

    Official Symbol
    Mrps2provided by MGI
    Official Full Name
    mitochondrial ribosomal protein S2provided by MGI
    Primary source
    MGI:MGI:2153089
    See related
    Ensembl:ENSMUSG00000035772
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1500019M10Rik
    Expression
    Ubiquitous expression in kidney adult (RPKM 23.2), adrenal adult (RPKM 20.6) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Mrps2 in Genome Data Viewer
    Location:
    2; 2 A3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (28355963..28361189)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (28465951..28471177)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (28323586..28326697)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene 13373 Neighboring gene RIKEN cDNA 1700007K13 gene Neighboring gene protein phosphatase 1, regulatory subunit 26 Neighboring gene ribosomal protein SA, pseudogene 9 Neighboring gene globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables structural constituent of ribosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial ribosome assembly ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in mitochondrial translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of mitochondrial small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of mitochondrial small ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    part_of mitochondrial small ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    part_of small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    28S ribosomal protein S2, mitochondrial
    Names
    MRP-S2
    S2mt

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001166031.2NP_001159503.2  28S ribosomal protein S2, mitochondrial isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
      Source sequence(s)
      AK051184, AK077219
      UniProtKB/Swiss-Prot
      Q924T2
      UniProtKB/TrEMBL
      Q8BQ99
      Conserved Domains (1) summary
      cd01425
      Location:62237
      RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...
    2. NM_080452.3NP_536700.3  28S ribosomal protein S2, mitochondrial isoform 1

      See identical proteins and their annotated locations for NP_536700.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longer isoform (1).
      Source sequence(s)
      AK051184, AK077219
      Consensus CDS
      CCDS15838.1
      UniProtKB/Swiss-Prot
      Q924T2
      UniProtKB/TrEMBL
      Q8BQ99
      Related
      ENSMUSP00000036725.4, ENSMUST00000038600.4
      Conserved Domains (1) summary
      cd01425
      Location:81256
      RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      28355963..28361189
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006497625.3XP_006497688.1  28S ribosomal protein S2, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_006497688.1

      Conserved Domains (1) summary
      cd01425
      Location:127302
      RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...
    2. XM_030246830.1XP_030102690.1  28S ribosomal protein S2, mitochondrial isoform X3

      Related
      ENSMUST00000146332.2
      Conserved Domains (1) summary
      cd01425
      Location:1158
      RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...
    3. XM_036157666.1XP_036013559.1  28S ribosomal protein S2, mitochondrial isoform X2

      Conserved Domains (1) summary
      cd01425
      Location:3160
      RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...
    4. XM_036157667.1XP_036013560.1  28S ribosomal protein S2, mitochondrial isoform X2

      Conserved Domains (1) summary
      cd01425
      Location:3160
      RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...
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