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    Klf16 Kruppel-like factor 16 [ Mus musculus (house mouse) ]

    Gene ID: 118445, updated on 23-Jun-2021

    Summary

    Official Symbol
    Klf16provided by MGI
    Official Full Name
    Kruppel-like factor 16provided by MGI
    Primary source
    MGI:MGI:2153049
    See related
    Ensembl:ENSMUSG00000035397
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    DR; DRRF; BTEB4; AI843742
    Expression
    Ubiquitous expression in ovary adult (RPKM 29.6), adrenal adult (RPKM 21.3) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Klf16 in Genome Data Viewer
    Location:
    10; 10 C1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (80402955..80413130, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (80567121..80577296, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (80029866..80040041, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene ATPase, class I, type 8B, member 3 Neighboring gene REX1, RNA exonuclease 1 Neighboring gene predicted gene, 31057 Neighboring gene predicted gene, 26710 Neighboring gene abhydrolase domain containing 17A

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Krueppel-like factor 16
    Names
    BTE-binding protein 4
    basic transcription element-binding protein 4
    dopamine receptor regulating factor
    transcription factor BTEB4

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_078477.2NP_510962.2  Krueppel-like factor 16

      See identical proteins and their annotated locations for NP_510962.2

      Status: VALIDATED

      Source sequence(s)
      AC152058, AK044577
      Consensus CDS
      CCDS24026.1
      UniProtKB/Swiss-Prot
      P58334
      UniProtKB/TrEMBL
      B2RPU7
      Related
      ENSMUSP00000048825.9, ENSMUST00000038558.9
      Conserved Domains (3) summary
      COG5048
      Location:124186
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:128150
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:172197
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      80402955..80413130 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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