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    Rplp0 ribosomal protein, large, P0 [ Mus musculus (house mouse) ]

    Gene ID: 11837, updated on 22-Aug-2021

    Summary

    Official Symbol
    Rplp0provided by MGI
    Official Full Name
    ribosomal protein, large, P0provided by MGI
    Primary source
    MGI:MGI:1927636
    See related
    Ensembl:ENSMUSG00000067274
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    A; 36B4; Arbp; L10E
    Expression
    Ubiquitous expression in liver E14.5 (RPKM 1138.0), liver E14 (RPKM 1116.3) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Rplp0 in Genome Data Viewer
    Location:
    5; 5 F
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (115697526..115701788)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (115559467..115563729)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (116009476..116013738)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S5 pseudogene Neighboring gene paxillin Neighboring gene predicted gene 13840 Neighboring gene GCN1 activator of EIF2AK4 Neighboring gene microRNA 7029 Neighboring gene RIKEN cDNA 1110006O24 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC107165, MGC107166

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables large ribosomal subunit rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables peptide binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables structural constituent of ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to interleukin-4 IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cytoplasmic translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in ribosomal large subunit assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasmic ribonucleoprotein granule ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of cytosolic large ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosolic ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dendrite IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in postsynapse ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in postsynaptic density ISO
    Inferred from Sequence Orthology
    more info
     
    part_of ribonucleoprotein complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    60S acidic ribosomal protein P0
    Names
    60S ribosomal protein L10E
    acidic ribosomal phosphoprotein P0

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007475.5NP_031501.1  60S acidic ribosomal protein P0

      See identical proteins and their annotated locations for NP_031501.1

      Status: VALIDATED

      Source sequence(s)
      AC159539, AK029816, BF021407
      Consensus CDS
      CCDS19594.1
      UniProtKB/Swiss-Prot
      P14869
      UniProtKB/TrEMBL
      Q5M8R8
      Related
      ENSMUSP00000083705.6, ENSMUST00000086519.12
      Conserved Domains (1) summary
      PTZ00135
      Location:1275
      PTZ00135; 60S acidic ribosomal protein P0; Provisional

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      115697526..115701788
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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