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    Bloc1s4 biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino [ Mus musculus (house mouse) ]

    Gene ID: 117197, updated on 31-Jan-2019

    Summary

    Official Symbol
    Bloc1s4provided by MGI
    Official Full Name
    biogenesis of lysosomal organelles complex-1, subunit 4, cappuccinoprovided by MGI
    Primary source
    MGI:MGI:1929230
    See related
    Ensembl:ENSMUSG00000060708
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cno; Blos4; 2610101N07Rik
    Orthologs

    Genomic context

    See Bloc1s4 in Genome Data Viewer
    Location:
    5; 5 B3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (36747374..36748679, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (37138613..37139918, complement)

    Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 33017 Neighboring gene predicted gene, 33114 Neighboring gene S100 calcium binding protein P pseudogene Neighboring gene Morf4 family associated protein 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    anterograde axonal transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    anterograde synaptic vesicle transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    melanosome organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neuromuscular process controlling balance IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neuron projection development NAS
    Non-traceable Author Statement
    more info
    PubMed 
    platelet aggregation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    BLOC-1 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    BLOC-1 complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    BLOC-1 complex ISO
    Inferred from Sequence Orthology
    more info
     
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    biogenesis of lysosome-related organelles complex 1 subunit 4
    Names
    BLOC-1 subunit 4
    biogenesis of organelles complex-1, subunit 4, cappuccino
    cappuccino
    protein cappuccino homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_133724.3NP_598485.1  biogenesis of lysosome-related organelles complex 1 subunit 4

      See identical proteins and their annotated locations for NP_598485.1

      Status: VALIDATED

      Source sequence(s)
      AK011795, AV291459, CK129009
      Consensus CDS
      CCDS19241.1
      UniProtKB/Swiss-Prot
      Q8VED2
      Related
      ENSMUSP00000071840.3, ENSMUST00000071949.4

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

      Range
      36747374..36748679 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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