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    nocT nopaline ABC transporter substrate-binding protein NocT [ Agrobacterium fabrum str. C58 ]

    Gene ID: 1137350, updated on 27-Aug-2024

    Summary

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    Gene symbol
    nocT
    Gene description
    nopaline ABC transporter substrate-binding protein NocT
    Locus tag
    ATU_RS23135
    Gene type
    protein coding
    RefSeq status
    PIPELINE
    Organism
    Agrobacterium fabrum str. C58 (strain: C58, culture-collection: ATCC:33970, type-material: type strain of Agrobacterium fabrum)
    Lineage
    Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex
    Old locus tag
    AGR_pTi_67; Atu6027
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    Genomic context

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    Location:
    plasmid: Ti
    Sequence:
    NC_003065.3 (38365..39216, complement)

    NC_003065.3Genomic Context describing neighboring genes Neighboring gene nopaline ABC transporter permease NocM Neighboring gene nopaline ABC transporter permease NocQ Neighboring gene nopaline ABC transporter ATP-binding protein NocP Neighboring gene LysR substrate-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003065.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fitness costs restrict niche expansion by generalist niche-constructing pathogens. Lang J, et al. ISME J, 2017 Feb. PMID 27801902, Free PMC Article
    2. Agrobacterium uses a unique ligand-binding mode for trapping opines and acquiring a competitive advantage in the niche construction on plant host. Lang J, et al. PLoS Pathog, 2014 Oct. PMID 25299655, Free PMC Article
    3. Structural basis for high specificity of octopine binding in the plant pathogen Agrobacterium tumefaciens. Vigouroux A, et al. Sci Rep, 2017 Dec 21. PMID 29269740, Free PMC Article
    4. Opine transport genes in the octopine (occ) and nopaline (noc) catabolic regions in Ti plasmids of Agrobacterium tumefaciens. Zanker H, et al. J Bacteriol, 1992 Feb. PMID 1732218, Free PMC Article
    5. The genome of the natural genetic engineer Agrobacterium tumefaciens C58. Wood DW, et al. Science, 2001 Dec 14. PMID 11743193

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    nopaline ABC transporter substrate-binding protein NocT

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003065.3 Reference assembly

      Range
      38365..39216 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_010891637.1 MULTISPECIES: nopaline ABC transporter substrate-binding protein NocT [Rhizobium/Agrobacterium group]

      See identical proteins and their annotated locations for WP_010891637.1

      Status: PIPELINE

      UniProtKB/Swiss-Prot
      P35120
      UniProtKB/TrEMBL
      A0A2Z2PM12, A0A2Z2PNX0, A0A2Z2PQF0, A0A546YXQ2, A0AAF0HDV5, Q9R6P2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P35120.2

    Gene LinkOut

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