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    Cse1l chromosome segregation 1-like (S. cerevisiae) [ Mus musculus (house mouse) ]

    Gene ID: 110750, updated on 31-Jan-2019

    Summary

    Official Symbol
    Cse1lprovided by MGI
    Official Full Name
    chromosome segregation 1-like (S. cerevisiae)provided by MGI
    Primary source
    MGI:MGI:1339951
    See related
    Ensembl:ENSMUSG00000002718
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cas; Xpo2; Capts; AA407533; 2610100P18Rik
    Expression
    Ubiquitous expression in placenta adult (RPKM 31.9), CNS E11.5 (RPKM 30.5) and 27 other tissues See more
    Orthologs

    Genomic context

    See Cse1l in Genome Data Viewer
    Location:
    2 H3; 2 87.22 cM
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (166906048..166946389)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (166731596..166771889)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) Neighboring gene predicted gene, 31204 Neighboring gene staufen double-stranded RNA binding protein 1 Neighboring gene GLE1 RNA export mediator pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    Ran GTPase binding IEA
    Inferred from Electronic Annotation
    more info
     
    nuclear export signal receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    protein export from nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein import into nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    nuclear envelope IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    exportin-2
    Names
    chromosome segregation 1-like protein
    exp2
    importin-alpha re-exporter

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023565.3NP_076054.1  exportin-2

      See identical proteins and their annotated locations for NP_076054.1

      Status: VALIDATED

      Source sequence(s)
      AL591711, AL591911
      Consensus CDS
      CCDS17092.1
      UniProtKB/Swiss-Prot
      Q9ERK4
      Related
      ENSMUSP00000002790.7, ENSMUST00000002790.13
      Conserved Domains (3) summary
      smart00913
      Location:29102
      IBN_N; Importin-beta N-terminal domain
      pfam03378
      Location:527962
      CAS_CSE1; CAS/CSE protein, C-terminus
      pfam08506
      Location:156525
      Cse1; Cse1

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      166906048..166946389
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_866207.2 RNA Sequence

      Related
      ENSMUST00000169290.7
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