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    Pnrc1 proline-rich nuclear receptor coactivator 1 [ Mus musculus (house mouse) ]

    Gene ID: 108767, updated on 5-Aug-2018

    Summary

    Official Symbol
    Pnrc1provided by MGI
    Official Full Name
    proline-rich nuclear receptor coactivator 1provided by MGI
    Primary source
    MGI:MGI:1917838
    See related
    Ensembl:ENSMUSG00000040128 Vega:OTTMUSG00000004941
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    B4-2; PRR2; Prol2; 5730463C12Rik
    Expression
    Broad expression in duodenum adult (RPKM 127.9), adrenal adult (RPKM 108.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Pnrc1 in Genome Data Viewer
    Location:
    4; 4 A5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 4 NC_000070.6 (33245423..33248787, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (33332398..33335762, complement)

    Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 7C, mitochondrial-like Neighboring gene serine/arginine-rich splicing factor 12 Neighboring gene RNA guanylyltransferase and 5'-phosphatase Neighboring gene microRNA 8118 Neighboring gene predicted gene, 32893

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    proline-rich nuclear receptor coactivator 1
    Names
    proline rich 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033225.2NP_001028397.2  proline-rich nuclear receptor coactivator 1

      See identical proteins and their annotated locations for NP_001028397.2

      Status: VALIDATED

      Source sequence(s)
      AK159693, AW456607, CK031485
      Consensus CDS
      CCDS18023.1
      UniProtKB/TrEMBL
      Q3TWH3
      Related
      ENSMUSP00000040377.9, OTTMUSP00000005132, ENSMUST00000049357.9, OTTMUST00000010991
      Conserved Domains (1) summary
      pfam15365
      Location:247295
      PNRC; Proline-rich nuclear receptor coactivator

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000070.6 Reference GRCm38.p4 C57BL/6J

      Range
      33245423..33248787 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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