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    Ankrd28 ankyrin repeat domain 28 [ Mus musculus (house mouse) ]

    Gene ID: 105522, updated on 31-Jan-2019

    Summary

    Official Symbol
    Ankrd28provided by MGI
    Official Full Name
    ankyrin repeat domain 28provided by MGI
    Primary source
    MGI:MGI:2145661
    See related
    Ensembl:ENSMUSG00000014496
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI465466; AI604979; mKIAA0379; E430019N21Rik
    Expression
    Ubiquitous expression in cerebellum adult (RPKM 5.4), CNS E14 (RPKM 4.7) and 28 other tissues See more
    Orthologs

    Genomic context

    See Ankrd28 in Genome Data Viewer
    Location:
    14; 14 B
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (31698768..31830415, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (32513201..32643601, complement)

    Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene 2-hydroxyacyl-CoA lyase 1 Neighboring gene biotinidase Neighboring gene uncharacterized LOC102640059 Neighboring gene predicted gene, 36164

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • KIAA0379

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A
    Names
    PITK
    PP6-ARS-A
    ankyrin repeat domain-containing protein 28
    phosphatase interactor targeting protein hnRNP K
    serine/threonine-protein phosphatase 6 regulatory subunit ARS-A

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001024604.2NP_001019775.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A

      See identical proteins and their annotated locations for NP_001019775.1

      Status: PROVISIONAL

      Source sequence(s)
      AC109509, AC113598, AC120375
      Consensus CDS
      CCDS36858.1
      UniProtKB/Swiss-Prot
      Q505D1
      Related
      ENSMUSP00000014640.7, ENSMUST00000014640.8
      Conserved Domains (5) summary
      cd00204
      Location:134259
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam00023
      Location:4271
      Ank; Ankyrin repeat
      pfam12796
      Location:177269
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:756808
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:140170
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

      Range
      31698768..31830415 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006518369.3XP_006518432.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X1

      Related
      ENSMUSP00000153992.1, ENSMUST00000227863.1
      Conserved Domains (5) summary
      cd00204
      Location:164289
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam00023
      Location:72101
      Ank; Ankyrin repeat
      pfam12796
      Location:207299
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:786838
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:170200
      ANK; ANK repeat [structural motif]
    2. XM_011244886.1XP_011243188.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X2

      Conserved Domains (4) summary
      cd00204
      Location:275404
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:215311
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:384436
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:246278
      ANK; ANK repeat [structural motif]

    RNA

    1. XR_383131.3 RNA Sequence

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