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    E330034G19Rik RIKEN cDNA E330034G19 gene [ Mus musculus (house mouse) ]

    Gene ID: 105418, updated on 19-May-2022

    Summary

    Official Symbol
    E330034G19Rikprovided by MGI
    Official Full Name
    RIKEN cDNA E330034G19 geneprovided by MGI
    Primary source
    MGI:MGI:2145557
    See related
    Ensembl:ENSMUSG00000038925 AllianceGenome:MGI:2145557
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Zpac; AA415275
    Summary
    Acts upstream of or within positive regulation of proteasomal ubiquitin-dependent protein catabolic process. Located in cytoplasm and nucleus. Is expressed in oocyte and ovary. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in testis adult (RPKM 1.8) and ovary adult (RPKM 0.8) See more
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    Genomic context

    See E330034G19Rik in Genome Data Viewer
    Location:
    14; 14 A3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (24343282..24360028)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (24293214..24309960)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (25112586..25129181)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene VISTA enhancer mm1485 Neighboring gene polymerase (RNA) III (DNA directed) polypeptide A pseudogene Neighboring gene cysteine rich protein 2 pseudogene Neighboring gene predicted gene, 41108

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Protein E330034G19Rik
    Names
    zygote-specific proteasome assembly chaperone

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033214.2NP_001028386.1  Protein E330034G19Rik isoform 1

      See identical proteins and their annotated locations for NP_001028386.1

      Status: VALIDATED

      Source sequence(s)
      AK136036
      Consensus CDS
      CCDS49418.1
      UniProtKB/TrEMBL
      Q3UWX6
      Related
      ENSMUST00000239244.2
      Conserved Domains (2) summary
      cd16269
      Location:289300
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:250313
      GBP_C; Guanylate-binding protein, C-terminal domain
    2. NM_001346536.1NP_001333465.1  Protein E330034G19Rik isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC161374, BG067232, CA555840
      Consensus CDS
      CCDS88596.1
      UniProtKB/TrEMBL
      E0CX49
      Related
      ENSMUST00000162224.8
    3. NM_001379547.1NP_001366476.1  Protein E330034G19Rik isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC161374
      Conserved Domains (1) summary
      TIGR02168
      Location:15278
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      24343282..24360028
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)