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    LOC105370820 uncharacterized LOC105370820 [ Homo sapiens (human) ]

    Gene ID: 105370820, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC105370820
    Gene description
    uncharacterized LOC105370820
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC105370820 in Genome Data Viewer
    Location:
    15q21.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (52221160..52237326)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (50029774..50045591)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9421 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9422 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6444 Neighboring gene BCL2 like 10 Neighboring gene G protein subunit beta 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9423 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_39709 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6445 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:52472339-52472840 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_39732 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:52483687-52484186 Neighboring gene competing endogenous lncRNA 1 for miR-4707-5p and miR-4767 Neighboring gene myosin VC Neighboring gene ReSE screen-validated silencer GRCh37_chr15:52521219-52521393 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:52549514-52550090 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:52552397-52552972 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr15:52578302-52579058 Neighboring gene microRNA 1266 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9425 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_39766 Neighboring gene uncharacterized LOC105370819 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6446

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      52221160..52237326
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007064638.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      50029774..50045591
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007085296.1 RNA Sequence