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    Tasor2 transcription activation suppressor family member 2 [ Mus musculus (house mouse) ]

    Gene ID: 105203, updated on 19-Feb-2019

    Summary

    Official Symbol
    Tasor2provided by MGI
    Official Full Name
    transcription activation suppressor family member 2provided by MGI
    Primary source
    MGI:MGI:2145274
    See related
    Ensembl:ENSMUSG00000033799
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pap20; Fam208b; AI645998; mKIAA2006
    Expression
    Broad expression in testis adult (RPKM 6.7), CNS E11.5 (RPKM 4.2) and 24 other tissues See more
    Orthologs

    Genomic context

    See Tasor2 in Genome Data Viewer
    Location:
    13; 13 A1
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (3566035..3611806, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (3565281..3610354, complement)

    Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700024F13 gene Neighboring gene predicted gene, 40654 Neighboring gene guanosine diphosphate (GDP) dissociation inhibitor 2 Neighboring gene transcription initiation factor IIA subunit 2-like Neighboring gene ankyrin repeat and SOCS box-containing 13

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • KIAA2006, MGC25933

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein FAM208B
    Names
    PBR associated protein
    family with sequence similarity 208, member B
    peripheral benzodiazepine receptor-associated protein 20
    peripherial benzodiazepine receptor associated protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001360838.1NP_001347767.1  protein FAM208B isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC129597
      Conserved Domains (2) summary
      pfam12480
      Location:94167
      DUF3699; Protein of unknown function (DUF3699)
      pfam12509
      Location:547699
      DUF3715; Protein of unknown function (DUF3715)
    2. NM_134063.3NP_598824.3  protein FAM208B isoform 1

      See identical proteins and their annotated locations for NP_598824.3

      Status: VALIDATED

      Source sequence(s)
      AK138119, AK220437, BC085160
      Consensus CDS
      CCDS49201.1
      UniProtKB/Swiss-Prot
      Q5DTT3
      Related
      ENSMUSP00000093774.3, ENSMUST00000096069.4
      Conserved Domains (2) summary
      pfam12480
      Location:91167
      DUF3699; Protein of unknown function (DUF3699)
      pfam12509
      Location:544695
      DUF3715; Protein of unknown function (DUF3715)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

      Range
      3566035..3611806 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006516460.3XP_006516523.1  protein FAM208B isoform X1

      See identical proteins and their annotated locations for XP_006516523.1

      UniProtKB/Swiss-Prot
      Q5DTT3
      Conserved Domains (2) summary
      pfam12480
      Location:91167
      DUF3699; Protein of unknown function (DUF3699)
      pfam12509
      Location:544695
      DUF3715; Protein of unknown function (DUF3715)
    2. XM_006516462.3XP_006516525.1  protein FAM208B isoform X2

      Conserved Domains (2) summary
      pfam12480
      Location:94167
      DUF3699; Protein of unknown function (DUF3699)
      pfam12509
      Location:547699
      DUF3715; Protein of unknown function (DUF3715)
    3. XM_006516461.3XP_006516524.1  protein FAM208B isoform X1

      See identical proteins and their annotated locations for XP_006516524.1

      UniProtKB/Swiss-Prot
      Q5DTT3
      Conserved Domains (2) summary
      pfam12480
      Location:91167
      DUF3699; Protein of unknown function (DUF3699)
      pfam12509
      Location:544695
      DUF3715; Protein of unknown function (DUF3715)
    4. XM_006516463.2XP_006516526.1  protein FAM208B isoform X3

      Conserved Domains (1) summary
      pfam12509
      Location:322473
      DUF3715; Protein of unknown function (DUF3715)
    5. XM_017315335.1XP_017170824.1  protein FAM208B isoform X4

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