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    Slc35e4 solute carrier family 35, member E4 [ Mus musculus (house mouse) ]

    Gene ID: 103710, updated on 23-Jun-2021

    Summary

    Official Symbol
    Slc35e4provided by MGI
    Official Full Name
    solute carrier family 35, member E4provided by MGI
    Primary source
    MGI:MGI:2144150
    See related
    Ensembl:ENSMUSG00000048807
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI414849; AI536442; A330108F03Rik
    Expression
    Broad expression in ovary adult (RPKM 18.3), lung adult (RPKM 15.6) and 23 other tissues See more
    Orthologs
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    Genomic context

    See Slc35e4 in Genome Data Viewer
    Location:
    11; 11 A1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (3857022..3864664, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (3907022..3914664, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (3807025..3814667, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene nucleolar protein 8 pseudogene Neighboring gene RIKEN cDNA 4921536K21 gene Neighboring gene dual specificity phosphatase 18 Neighboring gene transcobalamin 2 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • MGC28785

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables antiporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    solute carrier family 35 member E4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_153142.3NP_694782.1  solute carrier family 35 member E4

      See identical proteins and their annotated locations for NP_694782.1

      Status: VALIDATED

      Source sequence(s)
      AK039786
      Consensus CDS
      CCDS24370.1
      UniProtKB/Swiss-Prot
      Q8K3D6
      UniProtKB/TrEMBL
      A0A0R4J0N3
      Related
      ENSMUSP00000050978.2, ENSMUST00000051207.2
      Conserved Domains (2) summary
      COG0697
      Location:49324
      RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
      pfam00892
      Location:188324
      EamA; EamA-like transporter family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      3857022..3864664 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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