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    Mbtd1 mbt domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 103537, updated on 23-Jun-2021

    Summary

    Official Symbol
    Mbtd1provided by MGI
    Official Full Name
    mbt domain containing 1provided by MGI
    Primary source
    MGI:MGI:2143977
    See related
    Ensembl:ENSMUSG00000059474
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    hem; hemp; AA408199; AI194990
    Expression
    Broad expression in CNS E11.5 (RPKM 9.2), CNS E14 (RPKM 8.6) and 23 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Mbtd1 in Genome Data Viewer
    Location:
    11; 11 D
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (93776635..93837815)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (93885850..93946989)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (93747533..93808298)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 35148 Neighboring gene UTP18 small subunit processome component Neighboring gene ES cell cis-regulatory motifs 1a, 3b and 9b Neighboring gene NME/NM23 nucleoside diphosphate kinase 2 Neighboring gene NME/NM23 nucleoside diphosphate kinase 1 Neighboring gene predicted gene, 35198

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables chromatin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables methylated histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables methylated histone binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    MBT domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001346525.2NP_001333454.1  MBT domain-containing protein 1 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AK161472, AK162128, BB028323, BB527030, BC062907, BC064014, BY124943
      Consensus CDS
      CCDS83868.1
      UniProtKB/Swiss-Prot
      Q6P5G3
      Related
      ENSMUSP00000065442.5, ENSMUST00000063718.11
    2. NM_001363336.1NP_001350265.1  MBT domain-containing protein 1 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AK161472, AK162128, BB028323, BB527030, BC062907, BF162031, BU699337
      Consensus CDS
      CCDS48883.1
      Related
      ENSMUSP00000103485.2, ENSMUST00000107853.8
      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    3. NM_134012.4NP_598773.2  MBT domain-containing protein 1 isoform 1

      See identical proteins and their annotated locations for NP_598773.2

      Status: VALIDATED

      Source sequence(s)
      AK161472, AK162128, BB028323, BB527030, BC062907, BY124943
      Consensus CDS
      CCDS48883.1
      UniProtKB/Swiss-Prot
      Q6P5G3
      Related
      ENSMUSP00000103486.3, ENSMUST00000107854.9
      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      93776635..93837815
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006531906.3XP_006531969.1  MBT domain-containing protein 1 isoform X7

      See identical proteins and their annotated locations for XP_006531969.1

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    2. XM_036156180.1XP_036012073.1  MBT domain-containing protein 1 isoform X15

      Conserved Domains (1) summary
      smart00561
      Location:473565
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    3. XM_006531902.3XP_006531965.1  MBT domain-containing protein 1 isoform X6

      See identical proteins and their annotated locations for XP_006531965.1

      Conserved Domains (1) summary
      smart00561
      Location:473565
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    4. XM_006531898.3XP_006531961.1  MBT domain-containing protein 1 isoform X6

      See identical proteins and their annotated locations for XP_006531961.1

      Conserved Domains (1) summary
      smart00561
      Location:473565
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    5. XM_036156186.1XP_036012079.1  MBT domain-containing protein 1 isoform X19

      Conserved Domains (2) summary
      smart00561
      Location:304396
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      cl17705
      Location:1081
      MBT; mbt repeat
    6. XM_006531899.5XP_006531962.1  MBT domain-containing protein 1 isoform X6

      See identical proteins and their annotated locations for XP_006531962.1

      Conserved Domains (1) summary
      smart00561
      Location:473565
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    7. XM_036156174.1XP_036012067.1  MBT domain-containing protein 1 isoform X7

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    8. XM_006531903.4XP_006531966.1  MBT domain-containing protein 1 isoform X6

      See identical proteins and their annotated locations for XP_006531966.1

      Conserved Domains (1) summary
      smart00561
      Location:473565
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    9. XM_036156183.1XP_036012076.1  MBT domain-containing protein 1 isoform X18

      Conserved Domains (2) summary
      smart00561
      Location:304396
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      cl17705
      Location:1081
      MBT; mbt repeat
    10. XM_036156185.1XP_036012078.1  MBT domain-containing protein 1 isoform X19

      Conserved Domains (2) summary
      smart00561
      Location:304396
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      cl17705
      Location:1081
      MBT; mbt repeat
    11. XM_036156188.1XP_036012081.1  MBT domain-containing protein 1 isoform X20

      Conserved Domains (2) summary
      smart00561
      Location:304396
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      cl17705
      Location:1081
      MBT; mbt repeat
    12. XM_030245445.1XP_030101305.1  MBT domain-containing protein 1 isoform X7

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    13. XM_030245444.2XP_030101304.1  MBT domain-containing protein 1 isoform X7

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    14. XM_030245447.2XP_030101307.1  MBT domain-containing protein 1 isoform X16

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    15. XM_036156182.1XP_036012075.1  MBT domain-containing protein 1 isoform X17

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    16. XM_030245448.2XP_030101308.1  MBT domain-containing protein 1 isoform X16

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    17. XM_006531897.4XP_006531960.1  MBT domain-containing protein 1 isoform X6

      See identical proteins and their annotated locations for XP_006531960.1

      Conserved Domains (1) summary
      smart00561
      Location:473565
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    18. XM_006531887.5XP_006531950.1  MBT domain-containing protein 1 isoform X3

      See identical proteins and their annotated locations for XP_006531950.1

      Conserved Domains (1) summary
      smart00561
      Location:495587
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    19. XM_030245446.2XP_030101306.1  MBT domain-containing protein 1 isoform X10

      Conserved Domains (1) summary
      smart00561
      Location:495587
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    20. XM_030245441.2XP_030101301.1  MBT domain-containing protein 1 isoform X5

      Conserved Domains (1) summary
      smart00561
      Location:493585
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    21. XM_006531894.5XP_006531957.1  MBT domain-containing protein 1 isoform X6

      See identical proteins and their annotated locations for XP_006531957.1

      Conserved Domains (1) summary
      smart00561
      Location:473565
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    22. XM_006531900.5XP_006531963.1  MBT domain-containing protein 1 isoform X6

      See identical proteins and their annotated locations for XP_006531963.1

      Conserved Domains (1) summary
      smart00561
      Location:473565
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    23. XM_036156184.1XP_036012077.1  MBT domain-containing protein 1 isoform X18

      Conserved Domains (2) summary
      smart00561
      Location:304396
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      cl17705
      Location:1081
      MBT; mbt repeat
    24. XM_036156187.1XP_036012080.1  MBT domain-containing protein 1 isoform X19

      Conserved Domains (2) summary
      smart00561
      Location:304396
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      cl17705
      Location:1081
      MBT; mbt repeat
    25. XM_036156173.1XP_036012066.1  MBT domain-containing protein 1 isoform X7

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    26. XM_036156171.1XP_036012064.1  MBT domain-containing protein 1 isoform X3

      Conserved Domains (1) summary
      smart00561
      Location:495587
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    27. XM_030245442.2XP_030101302.1  MBT domain-containing protein 1 isoform X5

      Conserved Domains (1) summary
      smart00561
      Location:493585
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    28. XM_036156177.1XP_036012070.1  MBT domain-containing protein 1 isoform X12

      Conserved Domains (1) summary
      smart00561
      Location:493585
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    29. XM_006531884.5XP_006531947.1  MBT domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      smart00561
      Location:512604
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    30. XM_006531907.5XP_006531970.1  MBT domain-containing protein 1 isoform X8

      Conserved Domains (1) summary
      smart00561
      Location:512604
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    31. XM_006531885.5XP_006531948.1  MBT domain-containing protein 1 isoform X2

      Conserved Domains (1) summary
      smart00561
      Location:510602
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    32. XM_036156175.1XP_036012068.1  MBT domain-containing protein 1 isoform X7

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    33. XM_036156179.1XP_036012072.1  MBT domain-containing protein 1 isoform X15

      Conserved Domains (1) summary
      smart00561
      Location:473565
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    34. XM_006531905.4XP_006531968.1  MBT domain-containing protein 1 isoform X7

      See identical proteins and their annotated locations for XP_006531968.1

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    35. XM_006531891.5XP_006531954.1  MBT domain-containing protein 1 isoform X4

      Conserved Domains (1) summary
      smart00561
      Location:494586
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    36. XM_006531909.5XP_006531972.1  MBT domain-containing protein 1 isoform X13

      Conserved Domains (1) summary
      smart00561
      Location:512604
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    37. XM_036156178.1XP_036012071.1  MBT domain-containing protein 1 isoform X15

      Conserved Domains (1) summary
      smart00561
      Location:473565
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    38. XM_006531908.5XP_006531971.1  MBT domain-containing protein 1 isoform X9

      Conserved Domains (1) summary
      smart00561
      Location:510602
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    39. XM_017314202.3XP_017169691.1  MBT domain-containing protein 1 isoform X14

      Conserved Domains (1) summary
      smart00561
      Location:510602
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    40. XM_036156181.1XP_036012074.1  MBT domain-containing protein 1 isoform X16

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    41. XM_036156172.1XP_036012065.1  MBT domain-containing protein 1 isoform X7

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    42. XM_036156176.1XP_036012069.1  MBT domain-containing protein 1 isoform X11

      Conserved Domains (1) summary
      smart00561
      Location:494586
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    43. XM_006531904.4XP_006531967.1  MBT domain-containing protein 1 isoform X7

      See identical proteins and their annotated locations for XP_006531967.1

      Conserved Domains (1) summary
      smart00561
      Location:471563
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    44. XM_017314200.3XP_017169689.1  MBT domain-containing protein 1 isoform X6

      Conserved Domains (1) summary
      smart00561
      Location:473565
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    45. XM_006531901.5XP_006531964.1  MBT domain-containing protein 1 isoform X6

      See identical proteins and their annotated locations for XP_006531964.1

      Conserved Domains (1) summary
      smart00561
      Location:473565
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    46. XM_017314203.1XP_017169692.1  MBT domain-containing protein 1 isoform X18

      Conserved Domains (2) summary
      smart00561
      Location:304396
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      cl17705
      Location:1081
      MBT; mbt repeat
    47. XM_017314205.1XP_017169694.1  MBT domain-containing protein 1 isoform X19

      UniProtKB/Swiss-Prot
      Q6P5G3
      Conserved Domains (2) summary
      smart00561
      Location:304396
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      cl17705
      Location:1081
      MBT; mbt repeat
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