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    LOC103340079 succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [ Prunus mume (Japanese apricot) ]

    Gene ID: 103340079, updated on 26-Jun-2024
    Gene symbol
    LOC103340079
    Gene description
    succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Prunus mume
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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    Location:
    chromosome: LG8
    Exon count:
    16
    Annotation release Status Assembly LG Location
    101 current P.mume_V1.0 (GCF_000346735.1) LG8 NC_024133.1 (10846896..10852015)

    Linkage Group LG8 - NC_024133.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene cytochrome P450 90B1 Neighboring gene scarecrow-like protein 4 Neighboring gene uncharacterized LOC103340081

    Genomic Sequence:
    NC_024133.1 Chromosome LG8 Reference P.mume_V1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables succinate dehydrogenase (quinone) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial electron transport, succinate to ubiquinone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Prunus mume Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.mume_V1.0 Primary Assembly

    Genomic

    1. NC_024133.1 Reference P.mume_V1.0 Primary Assembly

      Range
      10846896..10852015
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008243445.1 → XP_008241667.1  succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial

      Conserved Domains (3) summary
      PLN00128
      Location:1 → 633
      PLN00128; Succinate dehydrogenase [ubiquinone] flavoprotein subunit
      pfam02910
      Location:502 → 633
      Succ_DH_flav_C; Fumarate reductase flavoprotein C-term
      cl21454
      Location:72 → 460
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

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