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    LOC103339316 lupeol synthase-like [ Prunus mume (Japanese apricot) ]

    Gene ID: 103339316, updated on 28-Dec-2023
    Gene symbol
    LOC103339316
    Gene description
    lupeol synthase-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Prunus mume
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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    Location:
    chromosome: LG8
    Exon count:
    18
    Annotation release Status Assembly LG Location
    101 current P.mume_V1.0 (GCF_000346735.1) LG8 NC_024133.1 (5258274..5266728)

    Linkage Group LG8 - NC_024133.1Genomic Context describing neighboring genes Neighboring gene AUGMIN subunit 1 Neighboring gene DNA-directed RNA polymerase V subunit 5A Neighboring gene uncharacterized protein At3g28850 Neighboring gene uncharacterized LOC103339310

    Genomic Sequence:
    NC_024133.1 Chromosome LG8 Reference P.mume_V1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables intramolecular transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in triterpenoid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lipid droplet IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    lupeol synthase-like

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Prunus mume Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.mume_V1.0 Primary Assembly

    Genomic

    1. NC_024133.1 Reference P.mume_V1.0 Primary Assembly

      Range
      5258274..5266728
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008242585.1 → XP_008240807.1  lupeol synthase-like

      Conserved Domains (2) summary
      PLN03012
      Location:1 → 755
      PLN03012; Camelliol C synthase
      cd02892
      Location:96 → 749
      SQCY_1; Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization ...
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases