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    LOC103322229 pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial [ Prunus mume (Japanese apricot) ]

    Gene ID: 103322229, updated on 19-Feb-2025
    Gene symbol
    LOC103322229
    Gene description
    pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Prunus mume
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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    Location:
    chromosome: LG2
    Exon count:
    16
    Annotation release Status Assembly LG Location
    101 current P.mume_V1.0 (GCF_000346735.1) LG2 NC_024127.1 (22136904..22142035)

    Linkage Group LG2 - NC_024127.1Genomic Context describing neighboring genes Neighboring gene uroporphyrinogen-III C-methyltransferase-like Neighboring gene uncharacterized LOC103322228 Neighboring gene uncharacterized protein At2g33490 Neighboring gene somatic embryogenesis receptor kinase 1-like

    Genomic Sequence:
    NC_024127.1 Chromosome LG2 Reference P.mume_V1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables pyruvate dehydrogenase (acetyl-transferring) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pyruvate decarboxylation to acetyl-CoA IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Prunus mume Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.mume_V1.0 Primary Assembly

    Genomic

    1. NC_024127.1 Reference P.mume_V1.0 Primary Assembly

      Range
      22136904..22142035
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008224123.2 → XP_008222345.1  pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial

      Conserved Domains (3) summary
      cd07036
      Location:47 → 213
      TPP_PYR_E1-PDHc-beta_like; Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins
      PLN02683
      Location:18 → 370
      PLN02683; pyruvate dehydrogenase E1 component subunit beta
      pfam02780
      Location:236 → 358
      Transketolase_C; Transketolase, C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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