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    TP53TG3F TP53 target 3 family member F [ Homo sapiens (human) ]

    Gene ID: 102724127, updated on 27-Aug-2024

    Summary

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    Official Symbol
    TP53TG3Fprovided by HGNC
    Official Full Name
    TP53 target 3 family member Fprovided by HGNC
    Primary source
    HGNC:HGNC:51817
    See related
    Ensembl:ENSG00000278848 AllianceGenome:HGNC:51817
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TP53TG3; TP53TG3B; TP53TG3C; TP53TG3D; TP53TG3E
    Summary
    Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in testis (RPKM 7.8), placenta (RPKM 0.6) and 2 other tissues See more
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    Genomic context

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    Location:
    16p11.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (33459612..33462249)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene TP53 target 3B Neighboring gene uncharacterized LOC105379473 Neighboring gene uncharacterized LOC105379474 Neighboring gene Sharpr-MPRA regulatory region 9819 Neighboring gene protein phosphatase 2 regulatory subunit B'', beta pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000016.10 Chromosome 16 Reference GRCh38.p14 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. Isolation and characterization of a novel TP53-inducible gene, TP53TG3. Ng CC, et al. Genes Chromosomes Cancer, 1999 Dec. PMID 10534768

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    General gene information

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    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TP53-target gene 3 protein
    Names
    TP53-inducible gene 3 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001330066.2 → NP_001316995.1  TP53-target gene 3 protein

      Status: VALIDATED

      Source sequence(s)
      AC136944
      Consensus CDS
      CCDS81976.1
      UniProtKB/Swiss-Prot
      B2R5K6, Q4KN31, Q9ULY9, Q9ULZ0
      Related
      ENSP00000485635.1, ENST00000623042.2

    RNA

    1. NR_158198.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC136944

    2. NR_158199.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC136944

    3. NR_158200.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC136944

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      33459612..33462249
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011546033.2 → XP_011544335.1  TP53-target gene 3 protein isoform X2

      See identical proteins and their annotated locations for XP_011544335.1

      UniProtKB/Swiss-Prot
      Q9ULZ0

    2. XM_017023956.2 → XP_016879445.1  TP53-target gene 3 protein isoform X1

      UniProtKB/TrEMBL
      I3L219
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ULZ0.2 GenPept UniProtKB/Swiss-Prot:Q9ULZ0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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    Research Materials