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    Psme3ip1 proteasome activator subunit 3 interacting protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 102122, updated on 23-Jun-2021

    Summary

    Official Symbol
    Psme3ip1provided by MGI
    Official Full Name
    proteasome activator subunit 3 interacting protein 1provided by MGI
    Primary source
    MGI:MGI:1919637
    See related
    Ensembl:ENSMUSG00000031774
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Fam19; Nip30; Fam192a; AI596259; 1700001O11Rik; 2310065K24Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 21.0), CNS E14 (RPKM 19.9) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Psme3ip1 in Genome Data Viewer
    Location:
    8; 8 C5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (95301568..95328483, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (94574940..94601962, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (97098840..97125626, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene NLR family, CARD domain containing 5 Neighboring gene predicted gene, 51584 Neighboring gene microRNA 7072 Neighboring gene copine II Neighboring gene predicted gene, 38555 Neighboring gene uncharacterized LOC115486880 Neighboring gene ring finger and SPRY domain containing 1 Neighboring gene ribosomal protein S2 pseudogene Neighboring gene ADP-ribosylation factor-like 2 binding protein

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of proteasomal protein catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    PSME3-interacting protein
    Names
    NEFA-interacting nuclear protein NIP30
    PA28G-interacting protein
    family with sequence similarity 192, member A
    protein FAM192A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001363456.1NP_001350385.1  PSME3-interacting protein isoform a

      Status: VALIDATED

      Source sequence(s)
      AC102358
      Consensus CDS
      CCDS40439.1
      Conserved Domains (1) summary
      pfam10187
      Location:1598
      Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
    2. NM_001363457.1NP_001350386.1  PSME3-interacting protein isoform b

      Status: VALIDATED

      Source sequence(s)
      AC102358
      Related
      ENSMUSP00000148506.2, ENSMUST00000212791.2
      Conserved Domains (1) summary
      pfam10187
      Location:1598
      Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
    3. NM_028221.4NP_082497.2  PSME3-interacting protein isoform a

      See identical proteins and their annotated locations for NP_082497.2

      Status: VALIDATED

      Source sequence(s)
      AK050704, BC016088, BY245102
      Consensus CDS
      CCDS40439.1
      UniProtKB/Swiss-Prot
      Q91WE2
      Related
      ENSMUSP00000034226.7, ENSMUST00000034226.8
      Conserved Domains (1) summary
      pfam10187
      Location:1598
      Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30

    RNA

    1. NR_156692.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC102358

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      95301568..95328483 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006530540.4XP_006530603.1  PSME3-interacting protein isoform X1

      See identical proteins and their annotated locations for XP_006530603.1

      UniProtKB/Swiss-Prot
      Q91WE2
      Conserved Domains (1) summary
      pfam10187
      Location:1598
      Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
    2. XM_006530541.4XP_006530604.1  PSME3-interacting protein isoform X1

      See identical proteins and their annotated locations for XP_006530604.1

      UniProtKB/Swiss-Prot
      Q91WE2
      Conserved Domains (1) summary
      pfam10187
      Location:1598
      Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
    3. XM_011248256.4XP_011246558.1  PSME3-interacting protein isoform X1

      See identical proteins and their annotated locations for XP_011246558.1

      UniProtKB/Swiss-Prot
      Q91WE2
      Conserved Domains (1) summary
      pfam10187
      Location:1598
      Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
    4. XM_036153704.1XP_036009597.1  PSME3-interacting protein isoform X1

      Conserved Domains (1) summary
      pfam10187
      Location:1598
      Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
    5. XM_036153703.1XP_036009596.1  PSME3-interacting protein isoform X1

      Conserved Domains (1) summary
      pfam10187
      Location:1598
      Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
    6. XM_006530542.4XP_006530605.1  PSME3-interacting protein isoform X1

      See identical proteins and their annotated locations for XP_006530605.1

      UniProtKB/Swiss-Prot
      Q91WE2
      Conserved Domains (1) summary
      pfam10187
      Location:1598
      Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
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