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    Gadd45gip1 growth arrest and DNA-damage-inducible, gamma interacting protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 102060, updated on 6-Nov-2018

    Summary

    Official Symbol
    Gadd45gip1provided by MGI
    Official Full Name
    growth arrest and DNA-damage-inducible, gamma interacting protein 1provided by MGI
    Primary source
    MGI:MGI:1914947
    See related
    Ensembl:ENSMUSG00000033751 Vega:OTTMUSG00000029999
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Crif1; Plinp1; MRP-L59; AI425883; 2310040G17Rik
    Expression
    Ubiquitous expression in adrenal adult (RPKM 129.2), ovary adult (RPKM 87.8) and 28 other tissues See more
    Orthologs

    Genomic context

    See Gadd45gip1 in Genome Data Viewer
    Location:
    8; 8 C2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 8 NC_000074.6 (84832282..84835482)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (87356181..87359381)

    Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA G430095P16 gene Neighboring gene nuclear factor I/X Neighboring gene DAN domain family member 5, BMP antagonist Neighboring gene RIKEN cDNA 1700122E12 gene Neighboring gene RAD23 homolog A, nucleotide excision repair protein Neighboring gene calreticulin Neighboring gene predicted gene 5911

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    mitochondrial ribosome binding IDA
    Inferred from Direct Assay
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
     
    Process Evidence Code Pubs
    cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    mitotic cell cycle arrest ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of cell proliferation IGI
    Inferred from Genetic Interaction
    more info
     
    positive regulation of oxidative phosphorylation IGI
    Inferred from Genetic Interaction
    more info
     
    Component Evidence Code Pubs
    mitochondrion HDA PubMed 
    mitochondrion IDA
    Inferred from Direct Assay
    more info
     
    mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    growth arrest and DNA damage-inducible proteins-interacting protein 1
    Names
    39S ribosomal protein L59, mitochondrial
    papillomavirus L2 interacting nuclear protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_183358.4NP_899202.3  growth arrest and DNA damage-inducible proteins-interacting protein 1

      See identical proteins and their annotated locations for NP_899202.3

      Status: VALIDATED

      Source sequence(s)
      AK002738, AK028227
      Consensus CDS
      CCDS22478.1
      UniProtKB/Swiss-Prot
      Q9CR59
      Related
      ENSMUSP00000037783.5, OTTMUSP00000038708, ENSMUST00000036734.5, OTTMUST00000074396
      Conserved Domains (1) summary
      pfam10147
      Location:42211
      CR6_interact; Growth arrest and DNA-damage-inducible proteins-interacting protein 1

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000074.6 Reference GRCm38.p4 C57BL/6J

      Range
      84832282..84835482
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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