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    Gadd45gip1 growth arrest and DNA-damage-inducible, gamma interacting protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 102060, updated on 13-Jul-2021

    Summary

    Official Symbol
    Gadd45gip1provided by MGI
    Official Full Name
    growth arrest and DNA-damage-inducible, gamma interacting protein 1provided by MGI
    Primary source
    MGI:MGI:1914947
    See related
    Ensembl:ENSMUSG00000033751
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cri; Crif1; Plinp1; MRP-L59; AI425883; 2310040G17Rik
    Expression
    Ubiquitous expression in adrenal adult (RPKM 129.2), ovary adult (RPKM 87.8) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Gadd45gip1 in Genome Data Viewer
    Location:
    8; 8 C3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (85558911..85562111)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (84832282..84835482)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (87356181..87359381)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene nuclear factor I/X Neighboring gene VISTA enhancer mm1615 Neighboring gene DAN domain family member 5, BMP antagonist Neighboring gene RIKEN cDNA 1700122E12 gene Neighboring gene RAD23 homolog A, nucleotide excision repair protein Neighboring gene calreticulin Neighboring gene predicted gene 5911

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables mitochondrial ribosome binding IDA
    Inferred from Direct Assay
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    growth arrest and DNA damage-inducible proteins-interacting protein 1
    Names
    39S ribosomal protein L59, mitochondrial
    papillomavirus L2 interacting nuclear protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_183358.4NP_899202.3  growth arrest and DNA damage-inducible proteins-interacting protein 1

      See identical proteins and their annotated locations for NP_899202.3

      Status: VALIDATED

      Source sequence(s)
      AK002738, AK028227
      Consensus CDS
      CCDS22478.1
      UniProtKB/Swiss-Prot
      Q9CR59
      Related
      ENSMUSP00000037783.6, ENSMUST00000036734.6
      Conserved Domains (1) summary
      pfam10147
      Location:42211
      CR6_interact; Growth arrest and DNA-damage-inducible proteins-interacting protein 1

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      85558911..85562111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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