Format

Send to:

Choose Destination
    • Showing Current items.

    D8Ertd738e DNA segment, Chr 8, ERATO Doi 738, expressed [ Mus musculus (house mouse) ]

    Gene ID: 101966, updated on 31-Jan-2019

    Summary

    Official Symbol
    D8Ertd738eprovided by MGI
    Official Full Name
    DNA segment, Chr 8, ERATO Doi 738, expressedprovided by MGI
    Primary source
    MGI:MGI:1289231
    See related
    Ensembl:ENSMUSG00000019362
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AA589584
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 54.2), kidney adult (RPKM 42.9) and 28 other tissues See more
    Orthologs

    Genomic context

    See D8Ertd738e in Genome Data Viewer
    Location:
    8 C2; 8 40.72 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 8 NC_000074.6 (84246233..84251711, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (86770134..86773660, complement)

    Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene microRNA 3074-2 Neighboring gene microRNA 24-2 Neighboring gene zinc finger SWIM-type containing 4 Neighboring gene predicted gene, 32760 Neighboring gene methylthioribose-1-phosphate isomerase 1 Neighboring gene coiled-coil domain containing 130 Neighboring gene THO complex 6 homolog pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC18818

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    leydig cell tumor 10 kDa protein homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007571.2NP_001007572.1  leydig cell tumor 10 kDa protein homolog

      See identical proteins and their annotated locations for NP_001007572.1

      Status: VALIDATED

      Source sequence(s)
      CA318976, CF740495
      Consensus CDS
      CCDS40408.1
      UniProtKB/Swiss-Prot
      Q8R1F0
      Related
      ENSMUSP00000019506.7, ENSMUST00000019506.8
      Conserved Domains (1) summary
      pfam09495
      Location:169
      DUF2462; Protein of unknown function (DUF2462)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000074.6 Reference GRCm38.p4 C57BL/6J

      Range
      84246233..84251711 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017312495.1XP_017167984.1  leydig cell tumor 10 kDa protein homolog isoform X1

      UniProtKB/Swiss-Prot
      Q8R1F0
      Conserved Domains (1) summary
      pfam09495
      Location:169
      DUF2462; Protein of unknown function (DUF2462)
    Support Center