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    TMED2-DT TMED2 divergent transcript [ Homo sapiens (human) ]

    Gene ID: 101927415, updated on 9-Jun-2025
    Official Symbol
    TMED2-DTprovided by HGNC
    Official Full Name
    TMED2 divergent transcriptprovided by HGNC
    Primary source
    HGNC:HGNC:53346
    See related
    AllianceGenome:HGNC:53346
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Location:
    12q24.31
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (123581066..123584327, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (123579932..123583192, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (124065613..124068874, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene microRNA 3908 Neighboring gene uncharacterized LOC124903042 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5047 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7271 Neighboring gene transmembrane p24 trafficking protein 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5048 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7272 Neighboring gene DEAD-box helicase 55 Neighboring gene uncharacterized LOC105370041 Neighboring gene small nucleolar RNA, H/ACA box 9B

    Go to nucleotide: Graphics FASTA GenBank

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Related articles in PubMed

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

    GeneRIFs: Gene References Into Functions

    Review eQTL and phenotype association data in this region using PheGenI

    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110049.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC055713, AK125282

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      123581066..123584327 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      123579932..123583192 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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