U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC101927245 uncharacterized LOC101927245 [ Homo sapiens (human) ]

    Gene ID: 101927245, updated on 9-Jun-2025
    Gene symbol
    LOC101927245
    Gene description
    uncharacterized LOC101927245
    See related
    Ensembl:ENSG00000283959
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table
    See LOC101927245 in Genome Data Viewer
    Location:
    8q22.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (102656248..102686725)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (103784493..103814959)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (103668476..103698953)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 12948 Neighboring gene POU class 5 homeobox 1 pseudogene 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:103646296-103646796 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:103646797-103647297 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:103665440-103666064 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19442 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:103667983-103668583 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:103669184-103669784 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:103669785-103670383 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19444 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27769 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27770 Neighboring gene KLF transcription factor 10 Neighboring gene uncharacterized LOC105375686 Neighboring gene KLF10-I enhancer Neighboring gene uncharacterized LOC105375685 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:103700001-103700501 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr8:103700723-103701233 Neighboring gene acireductone dioxygenase 1 pseudogene 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:103742478-103743190 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27771 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:103757245-103757757 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:103757758-103758269 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:103760121-103761078 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27772 Neighboring gene uncharacterized LOC124901999 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:103789111-103789615 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:103793799-103794298 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:103794977-103795477 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27773 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:103801212-103802107

    Go to nucleotide: Graphics FASTA GenBank

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    GeneRIFs: Gene References Into Functions

    Review eQTL and phenotype association data in this region using PheGenI

    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Homology

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_160672.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AP002851

    2. NR_160673.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AP002851
      Related
      ENST00000687500.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      102656248..102686725
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      103784493..103814959
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials