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    Faap24 Fanconi anemia core complex associated protein 24 [ Mus musculus (house mouse) ]

    Gene ID: 101831, updated on 31-Jan-2019

    Summary

    Official Symbol
    Faap24provided by MGI
    Official Full Name
    Fanconi anemia core complex associated protein 24provided by MGI
    Primary source
    MGI:MGI:2142208
    See related
    Ensembl:ENSMUSG00000030493
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AW124591; AW538696; C230052I12Rik
    Expression
    Ubiquitous expression in colon adult (RPKM 8.4), liver E14.5 (RPKM 6.5) and 28 other tissues See more
    Orthologs

    Genomic context

    See Faap24 in Genome Data Viewer
    Location:
    7; 7 B2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (35392152..35396767, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (36177171..36181786, complement)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene WD repeat domain 88 Neighboring gene G patch domain containing 1 Neighboring gene rhophilin, Rho GTPase binding protein 2 Neighboring gene centrosomal protein 89 Neighboring gene predicted gene, 42378 Neighboring gene SCAN domain containing 3 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    chromatin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    chromatin binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    DNA repair IEA
    Inferred from Electronic Annotation
    more info
     
    biological_process ND
    No biological Data available
    more info
     
    cellular response to DNA damage stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    interstrand cross-link repair IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Fanconi anaemia nuclear complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Fanconi anaemia nuclear complex ISO
    Inferred from Sequence Orthology
    more info
     
    intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Fanconi anemia core complex-associated protein 24
    Names
    Fanconi anemia-associated protein, 24 kDa
    fanconi anemia-associated protein of 24 kDa

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178643.5NP_848758.1  Fanconi anemia core complex-associated protein 24

      See identical proteins and their annotated locations for NP_848758.1

      Status: PROVISIONAL

      Source sequence(s)
      AC154126
      Consensus CDS
      CCDS21149.1
      UniProtKB/Swiss-Prot
      Q8BHL6
      Related
      ENSMUSP00000032704.5, ENSMUST00000032704.11
      Conserved Domains (1) summary
      pfam12826
      Location:166218
      HHH_2; Helix-hairpin-helix motif

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      35392152..35396767 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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