U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC101247061 divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic [ Solanum lycopersicum (tomato) ]

    Gene ID: 101247061, updated on 9-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC101247061
    Gene description
    divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC101247061 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current SL3.0 (GCF_000188115.4) 1 NC_015438.3 (75531394..75534814)
    102 previous assembly SL2.50 (GCF_000188115.3) 1 NC_015438.2 (75714372..75717764)

    Chromosome 1 - NC_015438.3Genomic Context describing neighboring genes Neighboring gene cullin-1-like Neighboring gene uncharacterized LOC112941328 Neighboring gene uncharacterized LOC101248131 Neighboring gene CASP-like protein 1 Neighboring gene uncharacterized LOC101247655 Neighboring gene CASP-like protein 1E2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SL3.0 Primary Assembly

    Genomic

    1. NC_015438.3 Reference SL3.0 Primary Assembly

      Range
      75531394..75534814
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010322908.3 → XP_010321210.1  divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic

      See identical proteins and their annotated locations for XP_010321210.1

      UniProtKB/TrEMBL
      A0A3Q7EGF4
      Conserved Domains (2) summary
      PLN02657
      Location:25 → 419
      PLN02657; 3,8-divinyl protochlorophyllide a 8-vinyl reductase
      cd05243
      Location:88 → 309
      SDR_a5; atypical (a) SDRs, subgroup 5

    2. XM_010322914.3 → XP_010321216.1  divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic

      See identical proteins and their annotated locations for XP_010321216.1

      UniProtKB/TrEMBL
      A0A3Q7EGF4
      Conserved Domains (2) summary
      PLN02657
      Location:25 → 419
      PLN02657; 3,8-divinyl protochlorophyllide a 8-vinyl reductase
      cd05243
      Location:88 → 309
      SDR_a5; atypical (a) SDRs, subgroup 5
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases