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    Scap SREBF chaperone [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100689048, updated on 8-Mar-2024

    Summary

    Gene symbol
    Scap
    Gene description
    SREBF chaperone
    Locus tag
    I79_011291
    See related
    Ensembl:ENSCGRG00015017113
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
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    Genomic context

    See Scap in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614047.1 (910893..941248)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (217832648..217863220)

    NW_003614047.1Genomic Context describing neighboring genes Neighboring gene chondroitin sulfate proteoglycan 5 Neighboring gene elongator acetyltransferase complex subunit 6 Neighboring gene protein tyrosine phosphatase non-receptor type 23 Neighboring gene neutrophilic granule protein

    Genomic regions, transcripts, and products

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables sterol binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in SREBP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    sterol regulatory element-binding protein cleavage-activating protein
    Names
    SREBP cleavage-activating protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001244036.1NP_001230965.1  sterol regulatory element-binding protein cleavage-activating protein

      See identical proteins and their annotated locations for NP_001230965.1

      Status: PROVISIONAL

      Source sequence(s)
      U67060
      UniProtKB/Swiss-Prot
      P97260, Q2WEK9
      UniProtKB/TrEMBL
      G3HKR2
      Related
      ENSCGRT00015027641.2
      Conserved Domains (5) summary
      smart00320
      Location:771802
      WD40; WD40 repeats
      COG2319
      Location:10881238
      WD40; WD40 repeat [General function prediction only]
      pfam12349
      Location:308457
      Sterol-sensing; Sterol-sensing domain of SREBP cleavage-activation
      sd00039
      Location:10041044
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:10751232
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003614047.1 Reference CriGri_1.0 Primary Assembly

      Range
      910893..941248
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048597.1 Alternate CriGri-PICRH-1.0

      Range
      217832648..217863220
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)