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    A330076C08Rik RIKEN cDNA A330076C08 gene [ Mus musculus (house mouse) ]

    Gene ID: 100503592, updated on 24-Sep-2025
    Official Symbol
    A330076C08Rikprovided by MGI
    Official Full Name
    RIKEN cDNA A330076C08 geneprovided by MGI
    Primary source
    MGI:MGI:2443693
    See related
    Ensembl:ENSMUSG00000113689 AllianceGenome:MGI:2443693
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in cerebellum adult (RPKM 1.4), testis adult (RPKM 0.7) and 4 other tissues See more
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    See A330076C08Rik in Genome Data Viewer
    Location:
    13 A4; 13 21.6 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (44347065..44369963, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (44193589..44216487, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_34353 Neighboring gene predicted gene 5083 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:44248648-44248835 Neighboring gene predicted gene, 33684 Neighboring gene STARR-seq mESC enhancer starr_34354 Neighboring gene predicted gene, 29676 Neighboring gene predicted gene, 53798

    Go to nucleotide: Graphics FASTA GenBank

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Markers

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045088.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC159239
      Related
      ENSMUST00000223513.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      44347065..44369963 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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