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    ret ret proto-oncogene [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100495902, updated on 20-Jun-2018

    Summary

    Official Symbol
    retprovided by Xenbase
    Official Full Name
    ret proto-oncogeneprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-485176
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    cret; xret; X-ret; c-ret
    Orthologs

    Genomic context

    See ret in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (44652894..44710417, complement)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668240.1 (46939778..46997313)

    Chromosome 7 - NC_030683.1Genomic Context describing neighboring genes Neighboring gene RasGEF domain family member 1A Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 2 Neighboring gene uncharacterized LOC105947916 Neighboring gene serine/threonine-protein kinase 3-like

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    proto-oncogene tyrosine-protein kinase receptor Ret

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030683.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      44652894..44710417 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002933895.4XP_002933941.2  proto-oncogene tyrosine-protein kinase receptor Ret isoform X2

      Conserved Domains (4) summary
      cd05045
      Location:710999
      PTKc_RET; Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein
      cd11304
      Location:2797
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam07714
      Location:711992
      Pkinase_Tyr; Protein tyrosine kinase
      cl09101
      Location:160242
      E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus
    2. XM_012966869.2XP_012822323.1  proto-oncogene tyrosine-protein kinase receptor Ret isoform X1

      Conserved Domains (4) summary
      cd05045
      Location:7111000
      PTKc_RET; Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein
      cd11304
      Location:2797
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam07714
      Location:712993
      Pkinase_Tyr; Protein tyrosine kinase
      cl09101
      Location:160242
      E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus
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