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    MMP2 matrix metallopeptidase 2 [ Taeniopygia guttata (zebra finch) ]

    Gene ID: 100228546, updated on 15-Feb-2018

    Summary

    Gene symbol
    MMP2
    Gene description
    matrix metallopeptidase 2
    See related
    Ensembl:ENSTGUG00000007337
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Taeniopygia guttata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
    Orthologs

    Genomic context

    See MMP2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Taeniopygia_guttata-3.2.4 (GCF_000151805.1) 11 NC_011475.1 (7464821..7494026, complement)

    Chromosome 11 - NC_011475.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 6 member 2 Neighboring gene lysophosphatidylcholine acyltransferase 2 Neighboring gene calpain small subunit 2 Neighboring gene iroquois homeobox 6 Neighboring gene iroquois homeobox 5

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_011475.1 Chromosome 11 Reference Taeniopygia_guttata-3.2.4 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General protein information

    Preferred Names
    72 kDa type IV collagenase
    Names
    matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Taeniopygia_guttata-3.2.4 Primary Assembly

    Genomic

    1. NC_011475.1 Reference Taeniopygia_guttata-3.2.4 Primary Assembly

      Range
      7464821..7494026 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002192669.2XP_002192705.1  72 kDa type IV collagenase

      UniProtKB/TrEMBL
      H0ZAJ9
      Related
      ENSTGUP00000007603, ENSTGUT00000007681
      Conserved Domains (5) summary
      smart00059
      Location:339387
      FN2; Fibronectin type 2 domain
      cd00094
      Location:467661
      HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
      cd04278
      Location:115442
      ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...
      pfam00413
      Location:115442
      Peptidase_M10; Matrixin
      pfam01471
      Location:6794
      PG_binding_1; Putative peptidoglycan binding domain
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