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    ACTA2-AS1 ACTA2 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 100132116, updated on 12-Jun-2022

    Summary

    Official Symbol
    ACTA2-AS1provided by HGNC
    Official Full Name
    ACTA2 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:45169
    See related
    Ensembl:ENSG00000180139 AllianceGenome:HGNC:45169
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ZXF1; UC001kfo; uc001kfo.1
    Expression
    Broad expression in endometrium (RPKM 434.7), prostate (RPKM 295.9) and 16 other tissues See more
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    Genomic context

    See ACTA2-AS1 in Genome Data Viewer
    Location:
    10q23.31
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    110 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (88932684..88939974)
    110 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (89816625..89823917)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (90692441..90699731)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902551 Neighboring gene pentatricopeptide repeat domain 2 pseudogene 2 Neighboring gene STAM binding protein like 1 Neighboring gene actin alpha 2, smooth muscle Neighboring gene Fas cell surface death receptor Neighboring gene FAS antisense RNA 1 Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_125373.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK093340
      Related
      ENST00000437930.4

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      88932684..88939974
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      89816625..89823917
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)