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    Adat3 adenosine deaminase, tRNA-specific 3 [ Mus musculus (house mouse) ]

    Gene ID: 100113398, updated on 19-Jul-2021

    Summary

    Official Symbol
    Adat3provided by MGI
    Official Full Name
    adenosine deaminase, tRNA-specific 3provided by MGI
    Primary source
    MGI:MGI:1924344
    See related
    Ensembl:ENSMUSG00000113640
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    A430024H01Rik
    Expression
    Ubiquitous expression in ovary adult (RPKM 16.7), testis adult (RPKM 16.7) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Adat3 in Genome Data Viewer
    Location:
    10; 10 C1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (80438714..80443488)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (80602880..80607654)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (80065625..80070399)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 26710 Neighboring gene abhydrolase domain containing 17A Neighboring gene secretory carrier membrane protein 4 Neighboring gene microRNA 6912 Neighboring gene predicted gene, 31298

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General protein information

    Preferred Names
    probable inactive tRNA-specific adenosine deaminase-like protein 3
    Names
    adenosine deaminase, tRNA-specific 3, TAD2 homolog
    tRNA-specific adenosine deaminase 3
    tRNA-specific adenosine deaminase-like protein 3
    tRNA-specific adenosine-34 deaminase subunit ADAT3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100606.1NP_001094076.1  probable inactive tRNA-specific adenosine deaminase-like protein 3

      See identical proteins and their annotated locations for NP_001094076.1

      Status: VALIDATED

      Source sequence(s)
      AK020747, BX632866, BY036102
      Consensus CDS
      CCDS48637.1
      UniProtKB/Swiss-Prot
      Q6PAT0
      Related
      ENSMUSP00000040551.5, ENSMUST00000038411.5
      Conserved Domains (1) summary
      COG0590
      Location:195345
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      80438714..80443488
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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