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    MHCX1 MHC class I heavy chain [ Equus caballus (horse) ]

    Gene ID: 100056391, updated on 12-Oct-2019

    Summary

    Gene symbol
    MHCX1
    Gene description
    MHC class I heavy chain
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus

    Genomic context

    See MHCX1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 20 NC_009163.3 (29901141..29961828)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 20 NC_009163.2 (28994107..28995851)

    Chromosome 20 - NC_009163.3Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 26 Neighboring gene uncharacterized LOC111769294 Neighboring gene uncharacterized LOC111769204 Neighboring gene HLA class I histocompatibility antigen, B-15 alpha chain-like Neighboring gene uncharacterized LOC111769199 Neighboring gene 7-51 putative nonclassical MHC class I antigen

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    MHC class I antigen 3.5
    Names
    MHC class I antigen 2.5
    MHC class I antigen 9.5

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001099766.1NP_001093236.1  MHC class I antigen 3.5 precursor

      See identical proteins and their annotated locations for NP_001093236.1

      Status: PROVISIONAL

      Source sequence(s)
      X71809
      UniProtKB/TrEMBL
      Q30488
      Conserved Domains (2) summary
      cd07698
      Location:203295
      IgC_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain
      pfam00129
      Location:21199
      MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2

    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009163.3 Reference EquCab3.0 Primary Assembly

      Range
      29901141..29961828
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023624055.1XP_023479823.1  MHC class I antigen 3.5 isoform X1

      Conserved Domains (2) summary
      cd07698
      Location:203295
      IgC_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain
      pfam00129
      Location:21199
      MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
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