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    Ahnak2 AHNAK nucleoprotein 2 [ Mus musculus (house mouse) ]

    Gene ID: 100041194, updated on 10-Oct-2019

    Summary

    Official Symbol
    Ahnak2provided by MGI
    Official Full Name
    AHNAK nucleoprotein 2provided by MGI
    Primary source
    MGI:MGI:2144831
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm72; Gm1185; AI450948
    Expression
    Biased expression in ovary adult (RPKM 46.7), colon adult (RPKM 40.7) and 13 other tissues See more
    Orthologs

    Genomic context

    See Ahnak2 in Genome Data Viewer
    Location:
    12; 12 F1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    108 current GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (112772190..112802701, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (114010404..114013975, complement)

    Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene transmembrane protein 11 pseudogene Neighboring gene phospholipase D family, member 4 Neighboring gene clathrin binding box of aftiphilin containing 1 Neighboring gene predicted gene, 52004 Neighboring gene predicted gene, 40588

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC170093, MGC170094

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    NOT plasma membrane repair IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of RNA splicing IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    T-tubule IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    NOT colocalizes_with T-tubule IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Z disc IDA
    Inferred from Direct Assay
    more info
    PubMed 
    costamere IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoplasmic vesicle membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein AHNAK2; LOW QUALITY PROTEIN: protein AHNAK2

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 108 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p6 C57BL/6J

    Genomic

    1. NC_000078.6 Reference GRCm38.p6 C57BL/6J

      Range
      112772190..112802701 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030247046.1XP_030102906.1  LOW QUALITY PROTEIN: protein AHNAK2 isoform X1

    Reference GRCm38.p6 PATCHES

    Genomic

    1. NW_019168521.1 Reference GRCm38.p6 PATCHES

      Range
      70892..98665 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030251791.1XP_030107651.1  protein AHNAK2 isoform X1

    2. XM_030251793.1XP_030107653.1  protein AHNAK2 isoform X2

    3. XM_030251792.1XP_030107652.1  protein AHNAK2 isoform X2

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001033476.1: Suppressed sequence

      Description
      NM_001033476.1: This RefSeq was permanently suppressed because the CDS was partial.
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