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    mapk13 mitogen-activated protein kinase 13 [ Danio rerio (zebrafish) ]

    Gene ID: 100002318, updated on 8-Dec-2018

    Summary

    Official Symbol
    mapk13provided by ZNC
    Official Full Name
    mitogen-activated protein kinase 13provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041111-17
    See related
    Ensembl:ENSDARG00000058470
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    im:7136778

    Genomic context

    See mapk13 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (10823040..10858897)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (10785342..10819981)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108191020 Neighboring gene family with sequence similarity 19 member A5, C-C motif chemokine, like Neighboring gene uncharacterized LOC110440005 Neighboring gene bromodomain and PHD finger containing, 3b Neighboring gene nuclear receptor subfamily 1, group H, member 5

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    MAP kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    MAP kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    cellular response to organic substance IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    intracellular signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of gene expression IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    mitogen-activated protein kinase 13
    XP_001337833.2

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      10823040..10858897
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001337797.8XP_001337833.2  mitogen-activated protein kinase 13

      UniProtKB/TrEMBL
      E7F292
      Related
      ENSDARP00000075784.5, ENSDART00000081341.7
      Conserved Domains (2) summary
      smart00220
      Location:23305
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cl21453
      Location:7347
      PKc_like; Protein Kinases, catalytic domain
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