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COX1 COXI [ Alosa sapidissima (American shad) ]

Gene ID: 9978347, updated on 23-Jun-2021

Summary

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Gene symbol
COX1
Gene description
COXI
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Alosa sapidissima
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupeomorpha; Clupeiformes; Clupeidae; Alosa
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Genomic context

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Annotation release Status Assembly Chr Location
100 current fAloSap1.pri (GCF_018492685.1) MT (non-nuclear) NC_014690.1 (5480..7030)

Chromosome MT - NC_014690.1Genomic Context describing neighboring genes Neighboring gene ND1 Neighboring gene ND2 Neighboring gene COXII Neighboring gene ATP8 Neighboring gene ATP6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014690.1 Chromosome MT Reference fAloSap1.pri non-nuclear

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mitochondrial genome of the American shad Alosa sapidissima. Bi YH, et al. Mitochondrial DNA, 2011 Feb. PMID 21314242

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
COXI
Names
cytochrome c oxidase subunit I

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014690.1 Reference assembly

    Range
    5480..7030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_004021551.1 cytochrome c oxidase subunit I (mitochondrion) [Alosa sapidissima]

    See identical proteins and their annotated locations for YP_004021551.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E3VXD5
    Conserved Domains (2) summary
    MTH00183
    Location:1 → 514
    COX1; cytochrome c oxidase subunit I; Provisional
    pfam00115
    Location:14 → 460
    COX1; Cytochrome C and Quinol oxidase polypeptide I
Nucleotide Protein
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