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SLC35E2A solute carrier family 35 member E2A [ Homo sapiens (human) ]

Gene ID: 9906, updated on 23-Nov-2021

Summary

Official Symbol
SLC35E2Aprovided by HGNC
Official Full Name
solute carrier family 35 member E2Aprovided by HGNC
Primary source
HGNC:HGNC:20863
See related
Ensembl:ENSG00000215790
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SLC35E2
Expression
Ubiquitous expression in brain (RPKM 10.4), ovary (RPKM 10.3) and 25 other tissues See more
Orthologs
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Genomic context

See SLC35E2A in Genome Data Viewer
Location:
1p36.33
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (1727385..1746070, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (1656277..1677509, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene matrix metallopeptidase 23A (pseudogene) Neighboring gene cyclin dependent kinase 11A Neighboring gene ribosomal protein S7 pseudogene Neighboring gene uncharacterized LOC112268218 Neighboring gene NAD kinase Neighboring gene Sharpr-MPRA regulatory region 14484

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Potential readthrough

Included gene: CDK11A

Homology

Other Names

  • solute carrier family 35 member E2

Clone Names

  • FLJ34996, FLJ44537, MGC104754, MGC117254, MGC126715, MGC138494, DKFZp686M0869

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables antiporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_173244.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL031282
  2. NR_173245.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL031282

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    1727385..1746070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001199787.2: Suppressed sequence

    Description
    NM_001199787.2: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  2. NM_182838.3: Suppressed sequence

    Description
    NM_182838.3: This RefSeq was removed because it is now thought that this gene is a pseudogene.
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