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phi-12Lp5 packaging NTPase P4 [ Pseudomonas phage phi12 ]

Gene ID: 984328, updated on 15-Aug-2018

Summary

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Gene symbol
phi-12Lp5
Gene description
packaging NTPase P4
Locus tag
phi-12Lp5
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Pseudomonas phage phi12 (nat-host: Pseudomonas syringae)
Lineage
Viruses; dsRNA viruses; Cystoviridae
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Genomic context

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Location:
segment: L
Sequence:
NC_004173.1 (3488..4483)

NC_004173.1Genomic Context describing neighboring genes Neighboring gene P15 protein Neighboring gene core protein P7 Neighboring gene RNA-dependent RNA polymerase Neighboring gene major core structural protein P1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004173.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of phi12, a bacteriophage related to phi6: nucleotide sequence of the large double-stranded RNA. Gottlieb P, et al. Virology, 2002 Apr 10. PMID 12033785

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
packaging NTPase P4
NP_690824.1
  • P4 is a hexameric packaging NTPase which belongs to the DnaB-like family. Though there is no sequence similarity, the NTP binding domain bears striking structural similarity to RecA/F1-ATPase-like motors. 12 hexamers of P4 are found at the 5-fold vertices of the procapsid and use ATP hydrolysis to actively transport L, M and S segments into the procapsid. RNA segments are packaged in order.

VOG classification

Description:

  • VOGp0520 [T] NTPase
  • RNA Replication, Transcription and Modification

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004173.1 Reference assembly

    Range
    3488..4483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_690824.1 NTPase P4 [Pseudomonas phage phi12]

    See identical proteins and their annotated locations for NP_690824.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q94M05
    Conserved Domains (1) summary
    PHA00520
    Location:1 → 331
    PHA00520; packaging NTPase P4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
1W44_A.1
1W44_B.1
1W44_C.1
1W46_A.1
1W46_B.1
1W46_C.1
1W47_A.1
1W47_B.1
1W47_C.1
1W48_A.1
1W48_B.1
1W48_C.1
1W49_A.1
1W49_B.1
1W49_C.1
1W4A_A.1
1W4A_B.1
1W4A_C.1
1W4B_A.1
1W4B_B.1
1W4B_C.1
1W4C_A.1
1W4C_B.1
1W4C_C.1
1W4C_D.1
1W4C_E.1
1W4C_F.1
1W4C_G.1
1W4C_H.1
1W4C_I.1
1W4C_J.1
1W4C_K.1
1W4C_L.1
1W4C_M.1
1W4C_N.1
1W4C_O.1
1W4C_P.1
1W4C_Q.1
1W4C_R.1
1W4C_S.1
1W4C_T.1
1W4C_U.1
1W4C_V.1
1W4C_W.1
1W4C_X.1
4BLR_A.1
4BLR_B.1
4BLR_C.1

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