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TMEM94 transmembrane protein 94 [ Homo sapiens (human) ]

Gene ID: 9772, updated on 6-Nov-2022

Summary

Official Symbol
TMEM94provided by HGNC
Official Full Name
transmembrane protein 94provided by HGNC
Primary source
HGNC:HGNC:28983
See related
Ensembl:ENSG00000177728 MIM:618163; AllianceGenome:HGNC:28983
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
IDDCDF; KIAA0195
Summary
Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in brain (RPKM 13.2), testis (RPKM 12.0) and 25 other tissues See more
Orthologs
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Genomic context

See TMEM94 in Genome Data Viewer
Location:
17q25.1
Exon count:
34
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (75456635..75500452)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (76350056..76393782)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (73452716..73496533)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 938, pseudogene Neighboring gene Sharpr-MPRA regulatory region 2319 Neighboring gene microRNA 6785 Neighboring gene CASK interacting protein 2 Neighboring gene Sharpr-MPRA regulatory region 12010 Neighboring gene tRNA splicing endonuclease subunit 54 Neighboring gene LLGL scribble cell polarity complex component 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ37545, DKFZp781M1056

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_054884.1 RefSeqGene

    Range
    20477..64294
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001321148.2NP_001308077.1  transmembrane protein 94 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AK316060, CN307648, D83779, DB545285, H06743
    Consensus CDS
    CCDS82204.1
    UniProtKB/Swiss-Prot
    Q12767
    UniProtKB/TrEMBL
    B7Z9U5, C9JL75
    Related
    ENSP00000364397.5, ENST00000375248.9
    Conserved Domains (1) summary
    COG0474
    Location:9881339
    MgtA; Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism]
  2. NM_001321149.2NP_001308078.1  transmembrane protein 94 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC100787, CN307648, D83779, DA317199, DB545285, H06743
    Consensus CDS
    CCDS92394.1
    UniProtKB/Swiss-Prot
    Q12767
    Related
    ENSP00000464679.2, ENST00000580918.2
    Conserved Domains (1) summary
    COG0474
    Location:9821333
    MgtA; Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism]
  3. NM_001351202.2NP_001338131.1  transmembrane protein 94 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC100787, H06743, KF456321
    Consensus CDS
    CCDS92392.1
    Related
    ENSP00000463487.2, ENST00000578853.2
    Conserved Domains (1) summary
    cl02929
    Location:12041313
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
  4. NM_001351203.2NP_001338132.1  transmembrane protein 94 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC100787, H06743, KF456321
    Conserved Domains (1) summary
    cl02929
    Location:12291338
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
  5. NM_014738.6NP_055553.3  transmembrane protein 94 isoform 1

    See identical proteins and their annotated locations for NP_055553.3

    Status: VALIDATED

    Source sequence(s)
    CN307648, D83779, DA317199, DB545285, H06743
    Consensus CDS
    CCDS32732.1
    UniProtKB/Swiss-Prot
    Q12767, Q86XF1
    UniProtKB/TrEMBL
    A0A024R8S6
    Related
    ENSP00000313885.7, ENST00000314256.12
    Conserved Domains (1) summary
    COG0474
    Location:9781329
    MgtA; Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism]

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    75456635..75500452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047437170.1XP_047293126.1  transmembrane protein 94 isoform X26

  2. XM_047437172.1XP_047293128.1  transmembrane protein 94 isoform X28

    UniProtKB/Swiss-Prot
    Q86XF1
    UniProtKB/TrEMBL
    A0A024R8S6
  3. XM_047437179.1XP_047293135.1  transmembrane protein 94 isoform X37

  4. XM_011525514.3XP_011523816.1  transmembrane protein 94 isoform X5

    See identical proteins and their annotated locations for XP_011523816.1

  5. XM_047437164.1XP_047293120.1  transmembrane protein 94 isoform X19

  6. XM_047437159.1XP_047293115.1  transmembrane protein 94 isoform X9

  7. XM_047437181.1XP_047293137.1  transmembrane protein 94 isoform X39

  8. XM_047437171.1XP_047293127.1  transmembrane protein 94 isoform X27

  9. XM_047437174.1XP_047293130.1  transmembrane protein 94 isoform X30

  10. XM_047437184.1XP_047293140.1  transmembrane protein 94 isoform X42

  11. XM_047437163.1XP_047293119.1  transmembrane protein 94 isoform X18

  12. XM_047437177.1XP_047293133.1  transmembrane protein 94 isoform X35

  13. XM_047437186.1XP_047293142.1  transmembrane protein 94 isoform X44

  14. XM_047437178.1XP_047293134.1  transmembrane protein 94 isoform X36

  15. XM_047437158.1XP_047293114.1  transmembrane protein 94 isoform X7

  16. XM_047437167.1XP_047293123.1  transmembrane protein 94 isoform X23

    Related
    ENST00000581085.5
  17. XM_047437168.1XP_047293124.1  transmembrane protein 94 isoform X24

  18. XM_017025440.3XP_016880929.1  transmembrane protein 94 isoform X11

  19. XM_047437182.1XP_047293138.1  transmembrane protein 94 isoform X40

    Related
    ENSP00000464437.2, ENST00000577247.6
  20. XM_047437173.1XP_047293129.1  transmembrane protein 94 isoform X29

  21. XM_047437183.1XP_047293139.1  transmembrane protein 94 isoform X41

  22. XM_047437176.1XP_047293132.1  transmembrane protein 94 isoform X33

  23. XM_047437185.1XP_047293141.1  transmembrane protein 94 isoform X43

  24. XM_047437165.1XP_047293121.1  transmembrane protein 94 isoform X21

  25. XM_047437187.1XP_047293143.1  transmembrane protein 94 isoform X45

  26. XM_047437180.1XP_047293136.1  transmembrane protein 94 isoform X38

  27. XM_017025433.2XP_016880922.1  transmembrane protein 94 isoform X1

  28. XM_017025442.2XP_016880931.1  transmembrane protein 94 isoform X13

  29. XM_017025434.2XP_016880923.1  transmembrane protein 94 isoform X2

  30. XM_017025444.2XP_016880933.1  transmembrane protein 94 isoform X15

  31. XM_017025436.2XP_016880925.1  transmembrane protein 94 isoform X4

  32. XM_005257864.3XP_005257921.1  transmembrane protein 94 isoform X20

    Conserved Domains (1) summary
    COG0474
    Location:9921343
    MgtA; Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism]
  33. XM_047437166.1XP_047293122.1  transmembrane protein 94 isoform X22

  34. XM_017025438.2XP_016880927.1  transmembrane protein 94 isoform X8

  35. XM_047437169.1XP_047293125.1  transmembrane protein 94 isoform X25

  36. XM_047437160.1XP_047293116.1  transmembrane protein 94 isoform X12

  37. XM_017025446.2XP_016880935.1  transmembrane protein 94 isoform X31

  38. XM_047437175.1XP_047293131.1  transmembrane protein 94 isoform X32

  39. XM_017025435.2XP_016880924.1  transmembrane protein 94 isoform X3

  40. XM_047437162.1XP_047293118.1  transmembrane protein 94 isoform X17

    Related
    ENST00000585105.5
  41. XM_017025437.2XP_016880926.1  transmembrane protein 94 isoform X6

  42. XM_017025439.2XP_016880928.1  transmembrane protein 94 isoform X10

  43. XM_017025443.2XP_016880932.1  transmembrane protein 94 isoform X14

  44. XM_017025448.2XP_016880937.1  transmembrane protein 94 isoform X34

  45. XM_047437161.1XP_047293117.1  transmembrane protein 94 isoform X16

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    76350056..76393782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)