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TMEM94 transmembrane protein 94 [ Homo sapiens (human) ]

Gene ID: 9772, updated on 27-Jun-2020

Summary

Official Symbol
TMEM94provided by HGNC
Official Full Name
transmembrane protein 94provided by HGNC
Primary source
HGNC:HGNC:28983
See related
Ensembl:ENSG00000177728 MIM:618163
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
IDDCDF; KIAA0195
Expression
Ubiquitous expression in brain (RPKM 13.2), testis (RPKM 12.0) and 25 other tissues See more
Orthologs

Genomic context

See TMEM94 in Genome Data Viewer
Location:
17q25.1
Exon count:
36
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (75441159..75500452)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (73452664..73496533)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 938, pseudogene Neighboring gene microRNA 3678 Neighboring gene Sharpr-MPRA regulatory region 2319 Neighboring gene microRNA 6785 Neighboring gene CASK interacting protein 2 Neighboring gene Sharpr-MPRA regulatory region 12010 Neighboring gene uncharacterized LOC107985023 Neighboring gene tRNA splicing endonuclease subunit 54

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ37545, DKFZp781M1056

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_054884.1 RefSeqGene

    Range
    20477..64294
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001321148.2NP_001308077.1  transmembrane protein 94 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AK316060, CN307648, D83779, DB545285, H06743
    Consensus CDS
    CCDS82204.1
    UniProtKB/Swiss-Prot
    Q12767
    UniProtKB/TrEMBL
    B7Z9U5, C9JL75
    Related
    ENSP00000364397.5, ENST00000375248.9
    Conserved Domains (1) summary
    COG0474
    Location:9881339
    MgtA; Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism]
  2. NM_001321149.2NP_001308078.1  transmembrane protein 94 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC100787, CN307648, D83779, DA317199, DB545285, H06743
    UniProtKB/Swiss-Prot
    Q12767
    Conserved Domains (1) summary
    COG0474
    Location:9821333
    MgtA; Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism]
  3. NM_001351202.2NP_001338131.1  transmembrane protein 94 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC100787, H06743, KF456321
    Conserved Domains (1) summary
    cl02929
    Location:12041313
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
  4. NM_001351203.2NP_001338132.1  transmembrane protein 94 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC100787, H06743, KF456321
    Conserved Domains (1) summary
    cl02929
    Location:12291338
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
  5. NM_014738.6NP_055553.3  transmembrane protein 94 isoform 1

    See identical proteins and their annotated locations for NP_055553.3

    Status: VALIDATED

    Source sequence(s)
    CN307648, D83779, DA317199, DB545285, H06743
    Consensus CDS
    CCDS32732.1
    UniProtKB/Swiss-Prot
    Q12767
    UniProtKB/TrEMBL
    A0A024R8S6
    Related
    ENSP00000313885.7, ENST00000314256.12
    Conserved Domains (1) summary
    COG0474
    Location:9781329
    MgtA; Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    75441159..75500452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011525516.1XP_011523818.1  transmembrane protein 94 isoform X4

    See identical proteins and their annotated locations for XP_011523818.1

  2. XM_011525514.2XP_011523816.1  transmembrane protein 94 isoform X4

    See identical proteins and their annotated locations for XP_011523816.1

  3. XM_017025440.2XP_016880929.1  transmembrane protein 94 isoform X9

    Related
    ENST00000581085.5
  4. XM_011525515.1XP_011523817.1  transmembrane protein 94 isoform X4

    See identical proteins and their annotated locations for XP_011523817.1

  5. XM_011525517.1XP_011523819.1  transmembrane protein 94 isoform X4

    See identical proteins and their annotated locations for XP_011523819.1

  6. XM_017025433.1XP_016880922.1  transmembrane protein 94 isoform X1

  7. XM_017025442.1XP_016880931.1  transmembrane protein 94 isoform X11

  8. XM_017025441.1XP_016880930.1  transmembrane protein 94 isoform X10

  9. XM_017025447.1XP_016880936.1  transmembrane protein 94 isoform X16

    Conserved Domains (1) summary
    cl02929
    Location:12181327
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
  10. XM_017025434.1XP_016880923.1  transmembrane protein 94 isoform X2

  11. XM_017025444.1XP_016880933.1  transmembrane protein 94 isoform X13

    Related
    ENST00000585105.5
  12. XM_017025436.1XP_016880925.1  transmembrane protein 94 isoform X5

  13. XM_005257864.2XP_005257921.1  transmembrane protein 94 isoform X14

    Conserved Domains (1) summary
    COG0474
    Location:9921343
    MgtA; Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism]
  14. XM_017025438.1XP_016880927.1  transmembrane protein 94 isoform X7

  15. XM_017025446.1XP_016880935.1  transmembrane protein 94 isoform X15

  16. XM_017025435.1XP_016880924.1  transmembrane protein 94 isoform X3

  17. XM_017025437.1XP_016880926.1  transmembrane protein 94 isoform X6

  18. XM_017025439.1XP_016880928.1  transmembrane protein 94 isoform X8

  19. XM_017025443.1XP_016880932.1  transmembrane protein 94 isoform X12

  20. XM_017025448.1XP_016880937.1  transmembrane protein 94 isoform X17

  21. XM_017025450.1XP_016880939.1  transmembrane protein 94 isoform X18

  22. XM_011525520.2XP_011523822.1  transmembrane protein 94 isoform X20

  23. XM_011525519.1XP_011523821.1  transmembrane protein 94 isoform X19

    Related
    ENSP00000463929.1, ENST00000579208.5
  24. XM_011525521.1XP_011523823.1  transmembrane protein 94 isoform X21

RNA

  1. XR_001752706.1 RNA Sequence

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