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SUSD6 sushi domain containing 6 [ Homo sapiens (human) ]

Gene ID: 9766, updated on 11-Jun-2021

Summary

Official Symbol
SUSD6provided by HGNC
Official Full Name
sushi domain containing 6provided by HGNC
Primary source
HGNC:HGNC:19956
See related
Ensembl:ENSG00000100647 MIM:616761
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DRAGO; KIAA0247
Expression
Ubiquitous expression in bone marrow (RPKM 26.4), appendix (RPKM 20.7) and 25 other tissues See more
Orthologs
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Genomic context

See SUSD6 in Genome Data Viewer
Location:
14q24.1
Exon count:
6
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (69611596..69715144)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (70078313..70181861)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene RPL24 pseudogene 3 Neighboring gene coiled-coil domain containing 177 Neighboring gene Sharpr-MPRA regulatory region 8327 Neighboring gene uncharacterized LOC100289511 Neighboring gene serine and arginine rich splicing factor 5 Neighboring gene solute carrier family 10 member 1 Neighboring gene Sharpr-MPRA regulatory region 10266

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • KIAA0247

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in cell death IDA
Inferred from Direct Assay
more info
PubMed 
involved_in cellular response to DNA damage stimulus IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
sushi domain-containing protein 6
Names
drug-activated gene overexpressed protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_014734.4NP_055549.1  sushi domain-containing protein 6 precursor

    See identical proteins and their annotated locations for NP_055549.1

    Status: VALIDATED

    Source sequence(s)
    AL355837, D87434, DC346928
    Consensus CDS
    CCDS9796.1
    UniProtKB/Swiss-Prot
    Q92537
    Related
    ENSP00000344424.4, ENST00000342745.5
    Conserved Domains (1) summary
    cd00033
    Location:42103
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    69611596..69715144
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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