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H3c15 H3 clustered histone 15 [ Mus musculus (house mouse) ]

Gene ID: 97114, updated on 15-Feb-2023

Summary

Official Symbol
H3c15provided by MGI
Official Full Name
H3 clustered histone 15provided by MGI
Primary source
MGI:MGI:2448357
See related
Ensembl:ENSMUSG00000081058 AllianceGenome:MGI:2448357
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
H3c2; H3c3; H3c4; H3c6; H3c7; H3c13; H3c14; H3-614; H3.2-614; Hist2h3c2; Hist2h3ca1; Hist2h3c2-ps
Summary
Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. This structure consists of approximately 146 bp of DNA wrapped around a nucleosome, an octamer composed of pairs of each of the four core histones (H2A, H2B, H3, and H4). The chromatin fiber is further compacted through the interaction of a linker histone, H1, with the DNA between the nucleosomes to form higher order chromatin structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H3 family. [provided by RefSeq, Aug 2015]
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Genomic context

See H3c15 in Genome Data Viewer
Location:
3; 3 F2.1
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (96145795..96146443, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (96238479..96239127, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene H2A clustered histone 20 Neighboring gene H2B clustered histone 21 Neighboring gene H2A clustered histone 19 Neighboring gene H2A clustered histone 18

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in nucleosome assembly ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of nucleosome ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
histone H3.2
Names
H3-clustered histone 13
H3-clustered histone 14
H3-clustered histone 2
H3-clustered histone 3
H3-clustered histone 4
H3-clustered histone 6
H3-clustered histone 7
histone 2, H3c2
histone 2, H3ca2
histone cluster 2, H3c2, pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_054045.5NP_473386.1  histone H3.2

    See identical proteins and their annotated locations for NP_473386.1

    Status: VALIDATED

    Source sequence(s)
    AC125099
    Consensus CDS
    CCDS57240.1
    UniProtKB/Swiss-Prot
    P84228, Q8CGN9
    UniProtKB/TrEMBL
    A0A6P5QY22, A0A8C6G9M9, B9EI85
    Related
    ENSMUSP00000135215.3, ENSMUST00000167403.4
    Conserved Domains (1) summary
    PTZ00018
    Location:1136
    PTZ00018; histone H3; Provisional

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    96145795..96146443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)