U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Nmd3 NMD3 ribosome export adaptor [ Mus musculus (house mouse) ]

Gene ID: 97112, updated on 5-Feb-2023

Summary

Official Symbol
Nmd3provided by MGI
Official Full Name
NMD3 ribosome export adaptorprovided by MGI
Primary source
MGI:MGI:2140103
See related
Ensembl:ENSMUSG00000027787 AllianceGenome:MGI:2140103
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable protein-macromolecule adaptor activity and ribosomal large subunit binding activity. Predicted to be involved in several processes, including positive regulation of protein binding activity; positive regulation of protein localization to nucleolus; and ribosomal large subunit export from nucleus. Predicted to act upstream of or within protein transport. Predicted to be located in nucleolus and nucleoplasm. Predicted to be active in cytoplasm and nucleus. Orthologous to human NMD3 (NMD3 ribosome export adaptor). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in placenta adult (RPKM 13.4), CNS E11.5 (RPKM 10.0) and 28 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Nmd3 in Genome Data Viewer
Location:
3; 3 E1- E2
Exon count:
16
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (69629301..69656380)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (69722055..69749047)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA48 Neighboring gene ribosomal protein L32, pseudogene Neighboring gene predicted gene, 52662 Neighboring gene ribosome production factor 2 homolog pseudogene Neighboring gene serine palmitoyltransferase, small subunit B Neighboring gene predicted gene, 52608

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity ISO
Inferred from Sequence Orthology
more info
 
enables ribosomal large subunit binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables ribosomal large subunit binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
60S ribosomal export protein NMD3
Names
NMD3 homolog

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001411212.1NP_001398141.1  60S ribosomal export protein NMD3 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  2. NM_001411213.1NP_001398142.1  60S ribosomal export protein NMD3 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  3. NM_001411214.1NP_001398143.1  60S ribosomal export protein NMD3 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  4. NM_001411215.1NP_001398144.1  60S ribosomal export protein NMD3 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  5. NM_001411216.1NP_001398145.1  60S ribosomal export protein NMD3 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  6. NM_001411217.1NP_001398146.1  60S ribosomal export protein NMD3 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  7. NM_001411218.1NP_001398147.1  60S ribosomal export protein NMD3 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  8. NM_001411219.1NP_001398148.1  60S ribosomal export protein NMD3 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  9. NM_001411220.1NP_001398149.1  60S ribosomal export protein NMD3 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  10. NM_001411221.1NP_001398150.1  60S ribosomal export protein NMD3 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  11. NM_001411222.1NP_001398151.1  60S ribosomal export protein NMD3 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  12. NM_001411223.1NP_001398152.1  60S ribosomal export protein NMD3 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  13. NM_001411224.1NP_001398153.1  60S ribosomal export protein NMD3 isoform 7

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  14. NM_001411225.1NP_001398154.1  60S ribosomal export protein NMD3 isoform 7

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
  15. NM_133787.3NP_598548.1  60S ribosomal export protein NMD3 isoform 1

    See identical proteins and their annotated locations for NP_598548.1

    Status: VALIDATED

    Source sequence(s)
    AC115035, AC162790
    Consensus CDS
    CCDS17407.1
    UniProtKB/Swiss-Prot
    Q8BM61, Q99L48
    Related
    ENSMUSP00000029358.9, ENSMUST00000029358.15
    Conserved Domains (1) summary
    pfam04981
    Location:17246
    NMD3; NMD3 family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    69629301..69656380
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036163432.1XP_036019325.1  60S ribosomal export protein NMD3 isoform X1

    Conserved Domains (1) summary
    pfam04981
    Location:1126
    NMD3; NMD3 family
  2. XM_036163433.1XP_036019326.1  60S ribosomal export protein NMD3 isoform X1

    Conserved Domains (1) summary
    pfam04981
    Location:1126
    NMD3; NMD3 family