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CEP135 centrosomal protein 135 [ Homo sapiens (human) ]

Gene ID: 9662, updated on 20-Dec-2019

Summary

Official Symbol
CEP135provided by HGNC
Official Full Name
centrosomal protein 135provided by HGNC
Primary source
HGNC:HGNC:29086
See related
Ensembl:ENSG00000174799 MIM:611423
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CEP4; MCPH8; KIAA0635
Summary
This gene encodes a centrosomal protein, which acts as a scaffolding protein during early centriole biogenesis, and is also required for centriole-centriole cohesion during interphase. Mutations in this gene are associated with autosomal recessive primary microcephaly-8. [provided by RefSeq, Jun 2012]
Expression
Broad expression in lymph node (RPKM 5.5), endometrium (RPKM 4.6) and 24 other tissues See more
Orthologs

Genomic context

See CEP135 in Genome Data Viewer
Location:
4q12
Exon count:
26
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (55948808..56033361)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (56814974..56899529)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377663 Neighboring gene exocyst complex component 1 Neighboring gene RNA, U6 small nuclear 652, pseudogene Neighboring gene VISTA enhancer hs1651 Neighboring gene capping protein inhibiting regulator of actin dynamics Neighboring gene RNA, 5S ribosomal pseudogene 161

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein C-terminus binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
centriole IDA
Inferred from Direct Assay
more info
PubMed 
centrosome IDA
Inferred from Direct Assay
more info
PubMed 
cytosol TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
centrosomal protein of 135 kDa
Names
centrosomal protein 135kDa
centrosomal protein 4
centrosome protein cep135

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032806.1 RefSeqGene

    Range
    5138..89554
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_025009.5NP_079285.2  centrosomal protein of 135 kDa

    See identical proteins and their annotated locations for NP_079285.2

    Status: REVIEWED

    Source sequence(s)
    BC136535, BK005586, BU734129, CA438857
    Consensus CDS
    CCDS33986.1
    UniProtKB/Swiss-Prot
    Q66GS9
    Related
    ENSP00000257287.3, ENST00000257287.5
    Conserved Domains (1) summary
    cl25732
    Location:1991038
    SMC_N; RecF/RecN/SMC N terminal domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    55948808..56033361
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006714055.3XP_006714118.1  centrosomal protein of 135 kDa isoform X1

    Conserved Domains (2) summary
    TIGR02168
    Location:1991027
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam06717
    Location:648852
    DUF1202; Protein of unknown function (DUF1202)
  2. XM_005265788.4XP_005265845.1  centrosomal protein of 135 kDa isoform X2

    Conserved Domains (2) summary
    COG1196
    Location:2756
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam06717
    Location:302506
    DUF1202; Protein of unknown function (DUF1202)
  3. XM_011534412.2XP_011532714.1  centrosomal protein of 135 kDa isoform X3

    Conserved Domains (1) summary
    pfam06717
    Location:149353
    DUF1202; Protein of unknown function (DUF1202)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_014645.1: Suppressed sequence

    Description
    NM_014645.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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