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SCHCODRAFT_53697 DNA ligase IV-like protein [ Schizophyllum commune H4-8 ]

Gene ID: 9590663, updated on 13-Aug-2016
Gene symbol
SCHCODRAFT_53697
Gene description
DNA ligase IV-like protein
Locus tag
SCHCODRAFT_53697
Gene type
protein coding
RNA name
DNA ligase IV-like protein
RefSeq status
PROVISIONAL
Organism
Schizophyllum commune H4-8 (strain: H4-8)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; Schizophyllum
Location:
chromosome: Unknown
Exon count:
21

NW_003315669.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Non-homologous end-joining, organism-specific biosystem (from KEGG)
    Non-homologous end-joining, organism-specific biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
  • Non-homologous end-joining, conserved biosystem (from KEGG)
    Non-homologous end-joining, conserved biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
Names
DNA ligase IV-like protein
XP_003032648.1
  • similar to DNA ligase IV

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003315669.1 Reference assembly

    Range
    1328227..1332889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003032602.1XP_003032648.1  DNA ligase IV-like protein [Schizophyllum commune H4-8]

    See identical proteins and their annotated locations for XP_003032648.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8Q0I4
    Conserved Domains (6) summary
    cd07903
    Location:256480
    Adenylation_DNA_ligase_IV; Adenylation domain of DNA Ligase IV
    TIGR00574
    Location:93629
    dnl1; DNA ligase I, ATP-dependent (dnl1)
    pfam04675
    Location:37221
    DNA_ligase_A_N; DNA ligase N terminus
    pfam16589
    Location:674764
    BRCT_2; BRCT domain, a BRCA1 C-terminus domain
    cl00038
    Location:9911057
    BRCT; Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo ...
    cl08424
    Location:483623
    OBF_DNA_ligase_family; The Oligonucleotide/oligosaccharide binding (OB)-fold domain is a DNA-binding module that is part of the catalytic core unit of ATP dependent DNA ligases
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