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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001284259.2 → NP_001271188.1 kinesin-like protein KIF20B isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AL157389, AL157400
- Consensus CDS
-
CCDS60590.1
- UniProtKB/Swiss-Prot
- A8MXM7, O43277, Q09471, Q2KQ73, Q32NE1, Q561V3, Q58EX8, Q5T9M8, Q5T9M9, Q5T9N0, Q5T9N1, Q7KZ68, Q7Z5E0, Q7Z5E1, Q7Z6M9, Q86X82, Q96Q89, Q9H3R8, Q9H6Q9, Q9H755, Q9NTC1, Q9UFR5
- Related
- ENSP00000360793.3, ENST00000371728.8
- Conserved Domains (4) summary
-
- COG1196
Location:629 → 1455
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd01368
Location:57 → 477
- KISc_KIF23_like; Kinesin motor domain, KIF23-like subgroup
- pfam00225
Location:64 → 479
- Kinesin; Kinesin motor domain
- cl19219
Location:1268 → 1357
- DUF342; Protein of unknown function (DUF342)
-
NM_001382506.1 → NP_001369435.1 kinesin-like protein KIF20B isoform 3
Status: VALIDATED
- Source sequence(s)
-
AL157389, AL157400
- Conserved Domains (4) summary
-
- COG1196
Location:558 → 1361
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PTZ00108
Location:1430 → 1716
- PTZ00108; DNA topoisomerase 2-like protein; Provisional
- cd01368
Location:57 → 406
- KISc_KIF23_like; Kinesin motor domain, KIF23-like subgroup
- cd21786
Location:529 → 583
- RBD_KIF20B; RAB6 binding domain (RBD) found in kinesin-like protein KIF20B, and similar proteins
-
NM_016195.4 → NP_057279.2 kinesin-like protein KIF20B isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region compared to isoform 1. The encoded isoform (2) is shorter compared to isoform 1.
- Source sequence(s)
-
AL157389, AL157400
- Consensus CDS
-
CCDS7407.1
- Related
- ENSP00000260753.4, ENST00000260753.8
- Conserved Domains (4) summary
-
- COG1196
Location:673 → 1392
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd01368
Location:57 → 477
- KISc_KIF23_like; Kinesin motor domain, KIF23-like subgroup
- pfam00225
Location:64 → 479
- Kinesin; Kinesin motor domain
- cl19219
Location:1228 → 1317
- DUF342; Protein of unknown function (DUF342)
RNA
-
NR_168374.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL157389, AL157400
-
NR_168375.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL157389, AL157400
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000010.11 Reference GRCh38.p14 Primary Assembly
- Range
-
89701590..89774934
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060934.1 Alternate T2T-CHM13v2.0
- Range
-
90585487..90658826
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)