NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001278661.2 → NP_001265590.1 zinc finger protein 254 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 3 encode isoform a.
- Source sequence(s)
-
AC092279, AW503073, BM876253, BM976089, BU783464, BX281205, CN267605, CN395850, DA501852, DA852860, DB539972
- Consensus CDS
-
CCDS74323.1
- UniProtKB/TrEMBL
-
A0A087WZJ7
- Related
- ENSP00000482703.1, ENST00000613065.4
- Conserved Domains (4) summary
-
- smart00349
Location:1 → 32
- KRAB; krueppel associated box
- COG5048
Location:138 → 553
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:367 → 387
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:436 → 460
- zf-H2C2_2; Zinc-finger double domain
-
NM_001278662.2 → NP_001265591.1 zinc finger protein 254 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 3 encode isoform a.
- Source sequence(s)
-
AW503073, BM876253, BM976089, BU783464, CN267605, CN395850, DA195951, DA501852, DA852860, DB286139, DB539972
- Consensus CDS
-
CCDS74323.1
- UniProtKB/TrEMBL
-
A0A087WZJ7
- Conserved Domains (4) summary
-
- smart00349
Location:1 → 32
- KRAB; krueppel associated box
- COG5048
Location:138 → 553
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:367 → 387
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:436 → 460
- zf-H2C2_2; Zinc-finger double domain
-
NM_001278663.2 → NP_001265592.1 zinc finger protein 254 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream in-frame start codon compared to variant 1. It encodes isoform c which has a shorter N-terminus compared to isoform a. Variants 5 and 6 encode isoform c.
- Source sequence(s)
-
AC092279, AK303431, BM876253, BM976089, BU783464, CN395850, DB539972
- Consensus CDS
-
CCDS62623.1
- UniProtKB/TrEMBL
-
F5H2M4
- Conserved Domains (4) summary
-
- COG5048
Location:94 → 509
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:379 → 399
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:155 → 174
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:392 → 416
- zf-H2C2_2; Zinc-finger double domain
-
NM_001278664.2 → NP_001265593.1 zinc finger protein 254 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream in-frame start codon compared to variant 1. It encodes isoform d which has a shorter N-terminus compared to isoform a.
- Source sequence(s)
-
AW503073, BM876253, BM976089, BU783464, CN267605, CN395850, DA501852, DA684942, DA852860, DB539972
- Consensus CDS
-
CCDS74324.1
- UniProtKB/TrEMBL
-
A0A087X0A2
- Related
- ENSP00000483222.1, ENST00000611359.3
- Conserved Domains (3) summary
-
- COG5048
Location:106 → 521
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:335 → 355
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:404 → 428
- zf-H2C2_2; Zinc-finger double domain
-
NM_001278665.2 → NP_001265594.1 zinc finger protein 254 isoform e
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) differs in both UTRs and has multiple coding region differences, compared to variant 1. This variant encodes isoform e, which is shorter than isoform a.
- Source sequence(s)
-
BC044906, BC056243
- Consensus CDS
-
CCDS62622.1
- UniProtKB/TrEMBL
-
Q7Z2R1
- Related
- ENSP00000341573.6, ENST00000339642.10
- Conserved Domains (1) summary
-
- smart00349
Location:13 → 73
- KRAB; krueppel associated box
-
NM_001278677.2 → NP_001265606.1 zinc finger protein 254 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes isoform a. Variants 1, 2, and 3 encode isoform a.
- Source sequence(s)
-
AC092279, AW503073, BM876253, BM976089, BU783464, CN267605, CN395850, DA101675, DA195951, DA501852, DA852860, DB539972
- Consensus CDS
-
CCDS74323.1
- UniProtKB/TrEMBL
-
A0A087WZJ7
- Conserved Domains (4) summary
-
- smart00349
Location:1 → 32
- KRAB; krueppel associated box
- COG5048
Location:138 → 553
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:367 → 387
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:436 → 460
- zf-H2C2_2; Zinc-finger double domain
-
NM_001278678.2 → NP_001265607.1 zinc finger protein 254 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream in-frame start codon compared to variant 1. It encodes isoform c which has a shorter N-terminus compared to isoform a. Variants 5 and 6 encode isoform c.
- Source sequence(s)
-
AW503073, BM876253, BM976089, BU783464, CN267605, CN395850, DA230395, DA501852, DA852860, DB539972
- Consensus CDS
-
CCDS62623.1
- UniProtKB/TrEMBL
-
F5H2M4
- Related
- ENSP00000484930.1, ENST00000616028.2
- Conserved Domains (4) summary
-
- COG5048
Location:94 → 509
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:379 → 399
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:155 → 174
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:392 → 416
- zf-H2C2_2; Zinc-finger double domain
-
NM_203282.4 → NP_975011.3 zinc finger protein 254 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and 5' coding region and uses an alternate start codon, compared to variant 1. The encoded isoform (b) has a distinct and longer N-terminus compared to isoform a.
- Source sequence(s)
-
AF054180, BC043147, BC139749, BM876253, BM976089, BU783464, CN395850, DB340394
- Consensus CDS
-
CCDS32983.1
- UniProtKB/Swiss-Prot
- A4QPC0, O75437, Q86XL7
- Related
- ENSP00000349494.3, ENST00000357002.5
- Conserved Domains (3) summary
-
- smart00349
Location:13 → 73
- KRAB; krueppel associated box
- COG5048
Location:264 → 625
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:408 → 428
- ZF_C2H2; C2H2 Zn finger [structural motif]
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_004876.2: Suppressed sequence
- Description
- NM_004876.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.