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TYMVgp2 replicase/papain-like protease [ Turnip yellow mosaic virus ]

Gene ID: 951158, updated on 15-Aug-2018
Gene symbol
TYMVgp2
Gene description
replicase/papain-like protease
Locus tag
TYMVgp2
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Turnip yellow mosaic virus
Lineage
Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales; Tymoviridae; Tymovirus
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Sequence:
NC_004063.1 (95..5629)

NC_004063.1Genomic Context describing neighboring genes Neighboring gene overlapping protein/movement protein Neighboring gene coat protein

Genomic Sequence:
NC_004063.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Overlapping open reading frames revealed by complete nucleotide sequencing of turnip yellow mosaic virus genomic RNA. Morch MD, et al. Nucleic Acids Res, 1988 Jul 11. PMID 3399388, Free PMC Article

GeneRIFs: Gene References Into Functions

Preferred Names
replicase/papain-like protease
Names
replicase/papain-like protease
RNA-dependent RNA polymerase

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004063.1 Reference assembly

    Range
    95..5629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_663297.1 replicase/papain-like protease [Turnip yellow mosaic virus]

    See identical proteins and their annotated locations for NP_663297.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P10358
    Conserved Domains (5) summary
    pfam00978
    Location:1546 → 1720
    RdRP_2; RNA dependent RNA polymerase
    pfam01443
    Location:971 → 1204
    Viral_helicase1; Viral (Superfamily 1) RNA helicase
    pfam01660
    Location:38 → 339
    Vmethyltransf; Viral methyltransferase
    pfam05381
    Location:779 → 879
    Peptidase_C21; Tymovirus endopeptidase
    cl11425
    Location:534 → 592
    PSI_PSAK; Photosystem I psaG / psaK

  2. NP_733818.1 replicase/papain-like protease

    Conserved Domains (4) summary
    pfam01443
    Location:971 → 1204
    Viral_helicase1; Viral (Superfamily 1) RNA helicase
    pfam01660
    Location:38 → 339
    Vmethyltransf; Viral methyltransferase
    pfam05381
    Location:779 → 879
    Peptidase_C21; Tymovirus endopeptidase
    cl11425
    Location:534 → 592
    PSI_PSAK; Photosystem I psaG / psaK

  3. NP_733819.1 RNA-dependent RNA polymerase

    Conserved Domains (1) summary
    pfam00978
    Location:287 → 461
    RdRP_2; RNA dependent RNA polymerase
Nucleotide Protein
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