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yfdV putative transport protein YfdV [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 949110, updated on 3-Dec-2024

Summary

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Official Symbol
yfdV
Official Full Name
putative transport protein YfdV
Primary source
ECOCYC:G7235
Locus tag
b2372
See related
ASAP:ABE-0007824
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2368
Summary
EvgAS regulon. the frc-oxc-yfdVE operon is adjacent and convergent on evgAS. [More information is available at EcoGene: EG14144]. The YfdV protein is an uncharacterised member of the AEC family of auxin efflux transporters. [More information is available at EcoCyc: G7235].
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Genomic context

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Sequence:
NC_000913.3 (2489242..2490186, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene sensor histidine kinase EvgS Neighboring gene acetyl-CoA:oxalate CoA-transferase Neighboring gene oxalyl-CoA decarboxylase Neighboring gene formyl-CoA transferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phenotypic screening of Escherichia coli K-12 Tn5 insertion libraries, using whole-genome oligonucleotide microarrays. Winterberg KM, et al. Appl Environ Microbiol, 2005 Jan. PMID 15640221, Free PMC Article
  2. Escherichia coli gene expression responsive to levels of the response regulator EvgA. Masuda N, et al. J Bacteriol, 2002 Nov. PMID 12399493, Free PMC Article
  3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  4. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative transport protein YfdV

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2489242..2490186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416873.1 putative transport protein YfdV [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416873.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7L7EJK9, A0A9P2I8F7
    Conserved Domains (1) summary
    PRK09903
    Location:1 → 314
    PRK09903; transporter YfdV
Nucleotide Protein
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