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yjhI putative DNA-binding transcriptional regulator YjhI [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 949100, updated on 3-Dec-2024
Official Symbol
yjhI
Official Full Name
putative DNA-binding transcriptional regulator YjhI
Primary source
ECOCYC:G7912
Locus tag
b4299
See related
ASAP:ABE-0014092
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4288
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Sequence:
NC_000913.3 (4525015..4525803, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene D-xylonate dehydratase Neighboring gene putative 2-dehydro-3-deoxy-D-pentonate aldolase Neighboring gene putative DNA-binding transcriptional regulator SgcR Neighboring gene putative epimerase SgcE

Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Pérez-Rueda E, et al. Nucleic Acids Res, 2000 Apr 15. PMID 10734204, Free PMC Article
  2. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475
  3. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
  4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
putative DNA-binding transcriptional regulator YjhI

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4525015..4525803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418719.1 putative DNA-binding transcriptional regulator YjhI [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418719.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3P5DHT2
    Conserved Domains (1) summary
    COG1414
    Location:8 → 251
    IclR; DNA-binding transcriptional regulator, IclR family [Transcription]
Nucleotide Protein
Heading Accession and Version

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